BLASTX nr result

ID: Coptis23_contig00023528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023528
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523215.1| Tyrosine-specific transport protein, putativ...   131   5e-29
ref|XP_002299650.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
gb|AAT40501.1| Tryptophan/tyrosine permease family protein [Sola...   125   3e-27
ref|XP_002267102.2| PREDICTED: tyrosine-specific transport prote...   124   6e-27
emb|CBI24305.3| unnamed protein product [Vitis vinifera]              124   6e-27

>ref|XP_002523215.1| Tyrosine-specific transport protein, putative [Ricinus communis]
           gi|223537511|gb|EEF39136.1| Tyrosine-specific transport
           protein, putative [Ricinus communis]
          Length = 477

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/77 (81%), Positives = 70/77 (90%)
 Frame = +3

Query: 3   LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRYSNDSESLKLPPLVPGGRFSLSLVM 182
           LLDPEIFFKALDFAGTYGVLVLFGILPAAM+WSDRYS+ S S+KLP LVPGGR +LS V+
Sbjct: 400 LLDPEIFFKALDFAGTYGVLVLFGILPAAMAWSDRYSSSSPSIKLPELVPGGRITLSFVI 459

Query: 183 GGAGYVILSEILENFTR 233
           GGAGY+I SEIL+NF R
Sbjct: 460 GGAGYIIFSEILDNFGR 476


>ref|XP_002299650.1| predicted protein [Populus trichocarpa] gi|222846908|gb|EEE84455.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +3

Query: 3   LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRYSNDSESLKLPPLVPGGRFSLSLVM 182
           LLDPEIFFKALDFAGTYGVLVLFGI+PAAM+WSDRYS+ S S+KLP LVPGG+ +LSLVM
Sbjct: 341 LLDPEIFFKALDFAGTYGVLVLFGIIPAAMAWSDRYSSSSTSIKLPQLVPGGKVTLSLVM 400

Query: 183 GGAGYVILSEILENF 227
           G AG +ILSEILENF
Sbjct: 401 GAAGCIILSEILENF 415


>gb|AAT40501.1| Tryptophan/tyrosine permease family protein [Solanum demissum]
          Length = 233

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/75 (78%), Positives = 68/75 (90%)
 Frame = +3

Query: 3   LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRYSNDSESLKLPPLVPGGRFSLSLVM 182
           LLDPEIFFKALDFAGTYGVLVLFG+LPAAMSWSDRYS  +++  LPPLVPGG+ ++SLV 
Sbjct: 156 LLDPEIFFKALDFAGTYGVLVLFGLLPAAMSWSDRYSESTQTPNLPPLVPGGKITISLVF 215

Query: 183 GGAGYVILSEILENF 227
           GGA +VILSEI+ENF
Sbjct: 216 GGAAFVILSEIVENF 230


>ref|XP_002267102.2| PREDICTED: tyrosine-specific transport protein-like [Vitis
           vinifera]
          Length = 482

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = +3

Query: 3   LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRYSNDSESLKLPPLVPGGRFSLSLVM 182
           LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDR S+  +S +LP LVPGG+ +LSL++
Sbjct: 405 LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRSSSSEQSPRLPYLVPGGKLTLSLII 464

Query: 183 GGAGYVILSEILENFTRP 236
           GGAG VILSE+LENF  P
Sbjct: 465 GGAGCVILSELLENFGHP 482


>emb|CBI24305.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = +3

Query: 3    LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRYSNDSESLKLPPLVPGGRFSLSLVM 182
            LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDR S+  +S +LP LVPGG+ +LSL++
Sbjct: 871  LLDPEIFFKALDFAGTYGVLVLFGILPAAMSWSDRSSSSEQSPRLPYLVPGGKLTLSLII 930

Query: 183  GGAGYVILSEILENFTRP 236
            GGAG VILSE+LENF  P
Sbjct: 931  GGAGCVILSELLENFGHP 948


Top