BLASTX nr result

ID: Coptis23_contig00023514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023514
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycin...   184   1e-44
ref|XP_003525244.1| PREDICTED: dynein light chain LC6, flagellar...   184   1e-44
ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-l...   182   3e-44
emb|CBI26852.3| unnamed protein product [Vitis vinifera]              182   3e-44
gb|ACU17238.1| unknown [Glycine max]                                  182   5e-44

>ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycine max]
           gi|255625837|gb|ACU13263.1| unknown [Glycine max]
          Length = 133

 Score =  184 bits (467), Expect = 1e-44
 Identities = 94/129 (72%), Positives = 104/129 (80%), Gaps = 3/129 (2%)
 Frame = -2

Query: 452 AEEELERRXXXXXXXXXXXKAVEQEEETELL---NVRVRASDMSLSLQNQAFKCARDSLD 282
           A+EELERR           K +EQ+E+ + L   NVRVRA DM L LQN+AF+CARD LD
Sbjct: 4   AQEELERRSKFLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQNRAFRCARDLLD 63

Query: 281 SMPNNKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLF 102
           SMP+ KLDSKRLAL LKKEFD+SYGPAWHCIVGTSFGSYVTHS GGF+YFSIDKVYVLLF
Sbjct: 64  SMPSKKLDSKRLALTLKKEFDTSYGPAWHCIVGTSFGSYVTHSFGGFVYFSIDKVYVLLF 123

Query: 101 KTTVEPLDH 75
           KT VEPLDH
Sbjct: 124 KTAVEPLDH 132


>ref|XP_003525244.1| PREDICTED: dynein light chain LC6, flagellar outer arm-like
           [Glycine max]
          Length = 133

 Score =  184 bits (466), Expect = 1e-44
 Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 3/129 (2%)
 Frame = -2

Query: 452 AEEELERRXXXXXXXXXXXKAVEQEEETELL---NVRVRASDMSLSLQNQAFKCARDSLD 282
           AEEELERR           K +EQ+E+ + L   NVRVRA DM L LQ++AF+CARD LD
Sbjct: 4   AEEELERRSKFLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQSRAFRCARDLLD 63

Query: 281 SMPNNKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLF 102
           SMP  KLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHS GGF+YFSIDKVYVLLF
Sbjct: 64  SMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYVLLF 123

Query: 101 KTTVEPLDH 75
           KT VEPLDH
Sbjct: 124 KTAVEPLDH 132


>ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-like [Vitis vinifera]
          Length = 127

 Score =  182 bits (463), Expect = 3e-44
 Identities = 96/126 (76%), Positives = 103/126 (81%)
 Frame = -2

Query: 452 AEEELERRXXXXXXXXXXXKAVEQEEETELLNVRVRASDMSLSLQNQAFKCARDSLDSMP 273
           AEEELERR           KA EQ +    LNVRVRASDM L+LQ++AFKCARD+LD+MP
Sbjct: 6   AEEELERRSKFLSSLIQKKKATEQHDH---LNVRVRASDMPLALQSRAFKCARDNLDAMP 62

Query: 272 NNKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTT 93
             KLDSKRLALALKKEFDS YGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLFKT 
Sbjct: 63  G-KLDSKRLALALKKEFDSLYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA 121

Query: 92  VEPLDH 75
           VEPLDH
Sbjct: 122 VEPLDH 127


>emb|CBI26852.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score =  182 bits (463), Expect = 3e-44
 Identities = 96/126 (76%), Positives = 103/126 (81%)
 Frame = -2

Query: 452 AEEELERRXXXXXXXXXXXKAVEQEEETELLNVRVRASDMSLSLQNQAFKCARDSLDSMP 273
           AEEELERR           KA EQ +    LNVRVRASDM L+LQ++AFKCARD+LD+MP
Sbjct: 4   AEEELERRSKFLSSLIQKKKATEQHDH---LNVRVRASDMPLALQSRAFKCARDNLDAMP 60

Query: 272 NNKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTT 93
             KLDSKRLALALKKEFDS YGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLFKT 
Sbjct: 61  G-KLDSKRLALALKKEFDSLYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA 119

Query: 92  VEPLDH 75
           VEPLDH
Sbjct: 120 VEPLDH 125


>gb|ACU17238.1| unknown [Glycine max]
          Length = 133

 Score =  182 bits (461), Expect = 5e-44
 Identities = 94/129 (72%), Positives = 103/129 (79%), Gaps = 3/129 (2%)
 Frame = -2

Query: 452 AEEELERRXXXXXXXXXXXKAVEQEEETELL---NVRVRASDMSLSLQNQAFKCARDSLD 282
           AEEELERR           K +EQ+E+ + L   NVRVRA DM L LQ++AF+CARD LD
Sbjct: 4   AEEELERRSKFLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQSRAFRCARDLLD 63

Query: 281 SMPNNKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLF 102
           SMP  KLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHS GGF+YFSIDKVYVLLF
Sbjct: 64  SMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYVLLF 123

Query: 101 KTTVEPLDH 75
           KT VEPL+H
Sbjct: 124 KTAVEPLNH 132


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