BLASTX nr result

ID: Coptis23_contig00023512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023512
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
emb|CBI16545.3| unnamed protein product [Vitis vinifera]               75   4e-12
emb|CAN74929.1| hypothetical protein VITISV_028364 [Vitis vinifera]    74   9e-12
ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonin...    69   4e-10
ref|XP_002303986.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10

>ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|222844877|gb|EEE82424.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/88 (45%), Positives = 51/88 (57%)
 Frame = +3

Query: 3   GSQMDRLNDPNSYANNSGLCGMQIQLPCPMTPPPEYLPRTEDSKFEAGDTWFSWXXXXXX 182
           G QMD +NDPNSYANNSGLCG QI LPCP  P PE   + +  + EA D+WFSW      
Sbjct: 716 GGQMDTMNDPNSYANNSGLCGFQILLPCP--PDPE---QPQVKQPEADDSWFSWQGAGIG 770

Query: 183 XXXXXXSALVTIYFSGYLNLAPRSSQHR 266
                 + +  I  SG ++  P  ++HR
Sbjct: 771 YSVGFFATITIILVSGCISRLPPQNRHR 798


>emb|CBI16545.3| unnamed protein product [Vitis vinifera]
          Length = 1252

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/90 (41%), Positives = 48/90 (53%)
 Frame = +3

Query: 3    GSQMDRLNDPNSYANNSGLCGMQIQLPCPMTPPPEYLPRTEDSKFEAGDTWFSWXXXXXX 182
            G QMD + DPN YANNSGLCGMQI++PCP    P   P+  D+K    + WF W      
Sbjct: 1158 GGQMDTMADPNYYANNSGLCGMQIRVPCPEDQSPAPKPQDYDNK----EPWFLWEGMGIG 1213

Query: 183  XXXXXXSALVTIYFSGYLNLAPRSSQHRLR 272
                    +  I+ +GY N +P S+ H  R
Sbjct: 1214 YPVGFLLTIGIIFLAGYFNPSPPSNNHHRR 1243


>emb|CAN74929.1| hypothetical protein VITISV_028364 [Vitis vinifera]
          Length = 530

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/87 (41%), Positives = 47/87 (54%)
 Frame = +3

Query: 3   GSQMDRLNDPNSYANNSGLCGMQIQLPCPMTPPPEYLPRTEDSKFEAGDTWFSWXXXXXX 182
           G QMD + DPN YANNSGLCGMQI++PCP    P   P+  D+K    + WF W      
Sbjct: 436 GGQMDTMADPNYYANNSGLCGMQIRVPCPEDQSPAPKPQDYDNK----EPWFLWEGMGIG 491

Query: 183 XXXXXXSALVTIYFSGYLNLAPRSSQH 263
                   +  I+ +GY N +P S+ H
Sbjct: 492 YPVGFLLTIGIIFLAGYFNPSPPSNNH 518


>ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
           [Vitis vinifera]
          Length = 814

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/90 (38%), Positives = 45/90 (50%)
 Frame = +3

Query: 3   GSQMDRLNDPNSYANNSGLCGMQIQLPCPMTPPPEYLPRTEDSKFEAGDTWFSWXXXXXX 182
           G QM  + DP  YANNSGLCGMQI++PCP   PP     +   +    D WF W      
Sbjct: 720 GGQMSTMADPIYYANNSGLCGMQIRVPCPEDEPPP----SGSLEHHTRDPWFLWEGVGIG 775

Query: 183 XXXXXXSALVTIYFSGYLNLAPRSSQHRLR 272
                  A+  I+ +GY    P +S+HR R
Sbjct: 776 YPVGFLLAIGIIFLTGYFTPPPTNSRHRRR 805


>ref|XP_002303986.1| predicted protein [Populus trichocarpa] gi|222841418|gb|EEE78965.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/88 (40%), Positives = 44/88 (50%)
 Frame = +3

Query: 3   GSQMDRLNDPNSYANNSGLCGMQIQLPCPMTPPPEYLPRTEDSKFEAGDTWFSWXXXXXX 182
           G QMD +ND NSYANNSGLCGM      P   PP  LP T+DS       WFSW      
Sbjct: 13  GGQMDTMNDSNSYANNSGLCGM------PTEQPPVKLPETDDS-------WFSWQGAGIG 59

Query: 183 XXXXXXSALVTIYFSGYLNLAPRSSQHR 266
                 + + TI F+G++   P  +  R
Sbjct: 60  YSVGFFAIIATILFTGFIGKLPSQNARR 87


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