BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023508
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm...   112   8e-43
emb|CBI22666.3| unnamed protein product [Vitis vinifera]              116   2e-39
ref|XP_003589418.1| Polyadenylate-binding protein [Medicago trun...   114   2e-39
gb|AFK40282.1| unknown [Medicago truncatula]                          114   3e-39
ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-l...   114   8e-39

>ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
           gi|223547567|gb|EEF49062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 170

 Score =  112 bits (280), Expect(2) = 8e-43
 Identities = 48/67 (71%), Positives = 60/67 (89%)
 Frame = -3

Query: 863 DSDNLFDDKCDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFAF 684
           DS+   D+K + +LY+GN+D +ITEA LIKMFSP+GKIV+ED+LWHTRGPKRGEPRGFAF
Sbjct: 3   DSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAF 62

Query: 683 IQFNTKE 663
           +QF+TKE
Sbjct: 63  VQFSTKE 69



 Score = 89.0 bits (219), Expect(2) = 8e-43
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -2

Query: 654 QEAELAKEKMNGKLACGRPLVVRFASEKYVVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 475
           +EAELAKEKM+G+LACGRPLVVR ASEKY+ EA  N  +A  E  K+S  G +SGQ+SR+
Sbjct: 69  EEAELAKEKMHGRLACGRPLVVRLASEKYLEEAAQNSCRAVGEMKKTSTAGGTSGQMSRN 128

Query: 474 XXXXXXXXXXXAMEDEGSSLKKAK 403
                       +E+EGSS+KK K
Sbjct: 129 AKIAAIKNKLRTLEEEGSSVKKQK 152


>emb|CBI22666.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score =  116 bits (290), Expect(2) = 2e-39
 Identities = 49/71 (69%), Positives = 62/71 (87%)
 Frame = -3

Query: 875 CSFMDSDNLFDDKCDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPR 696
           CS MD ++L D KC+ RL+IGN+D +++E  LIKMFSPFGKIV ED++WHTRGPKRGEPR
Sbjct: 16  CSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPR 75

Query: 695 GFAFIQFNTKE 663
           GFAF++F+TKE
Sbjct: 76  GFAFVEFSTKE 86



 Score = 73.9 bits (180), Expect(2) = 2e-39
 Identities = 40/84 (47%), Positives = 51/84 (60%)
 Frame = -2

Query: 654 QEAELAKEKMNGKLACGRPLVVRFASEKYVVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 475
           +EAELAKEKM+GKL CGRPL VR A+EK ++E      +     +KSSL G SSGQ+SRS
Sbjct: 86  EEAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRS 145

Query: 474 XXXXXXXXXXXAMEDEGSSLKKAK 403
                       ME+E +  K+ K
Sbjct: 146 AKIAAIKNKLKEMEEESNGTKRQK 169


>ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|357473041|ref|XP_003606805.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355478466|gb|AES59669.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355507860|gb|AES89002.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 157

 Score =  114 bits (286), Expect(2) = 2e-39
 Identities = 49/68 (72%), Positives = 61/68 (89%)
 Frame = -3

Query: 866 MDSDNLFDDKCDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFA 687
           MD +   DDKC+ RLY+GN+D +ITEA L+KMFSP+GKI++ED+LWHTRGPKRGEPRGFA
Sbjct: 1   MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60

Query: 686 FIQFNTKE 663
           FIQ++TKE
Sbjct: 61  FIQYSTKE 68



 Score = 75.1 bits (183), Expect(2) = 2e-39
 Identities = 40/84 (47%), Positives = 50/84 (59%)
 Frame = -2

Query: 654 QEAELAKEKMNGKLACGRPLVVRFASEKYVVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 475
           +EA LAKEKM+G+LAC RPLVVR A E+Y +E   +  KA SEG K  L G   GQ SRS
Sbjct: 68  EEAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127

Query: 474 XXXXXXXXXXXAMEDEGSSLKKAK 403
                      ++E++ S  KK K
Sbjct: 128 AKIAAIKNKLKSLEEDNSKTKKQK 151


>gb|AFK40282.1| unknown [Medicago truncatula]
          Length = 157

 Score =  114 bits (286), Expect(2) = 3e-39
 Identities = 49/68 (72%), Positives = 61/68 (89%)
 Frame = -3

Query: 866 MDSDNLFDDKCDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFA 687
           MD +   DDKC+ RLY+GN+D +ITEA L+KMFSP+GKI++ED+LWHTRGPKRGEPRGFA
Sbjct: 1   MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60

Query: 686 FIQFNTKE 663
           FIQ++TKE
Sbjct: 61  FIQYSTKE 68



 Score = 74.7 bits (182), Expect(2) = 3e-39
 Identities = 39/84 (46%), Positives = 50/84 (59%)
 Frame = -2

Query: 654 QEAELAKEKMNGKLACGRPLVVRFASEKYVVEAEGNQLKAPSEGSKSSLVGNSSGQVSRS 475
           +EA LAKEKM+G+LAC RPLV+R A E+Y +E   +  KA SEG K  L G   GQ SRS
Sbjct: 68  EEAILAKEKMHGRLACSRPLVIRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127

Query: 474 XXXXXXXXXXXAMEDEGSSLKKAK 403
                      ++E++ S  KK K
Sbjct: 128 AKIAAIKNKLKSLEEDNSKTKKQK 151


>ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
           gi|449497265|ref|XP_004160356.1| PREDICTED: probable
           RNA-binding protein 18-like [Cucumis sativus]
          Length = 171

 Score =  114 bits (284), Expect(2) = 8e-39
 Identities = 48/68 (70%), Positives = 62/68 (91%)
 Frame = -3

Query: 866 MDSDNLFDDKCDRRLYIGNIDHKITEALLIKMFSPFGKIVAEDYLWHTRGPKRGEPRGFA 687
           MDS+   D+KC+ +LYIGN+D +ITEA LIK+FSPFGKI++ED+LWHTRGPKRGEPRGFA
Sbjct: 1   MDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 60

Query: 686 FIQFNTKE 663
           FI++++KE
Sbjct: 61  FIEYSSKE 68



 Score = 73.9 bits (180), Expect(2) = 8e-39
 Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -2

Query: 660 SMQEAELAKEKMNGKLACGRPLVVRFASEKYVVEAEGNQLKAPSEGSKSSLVGNSSGQVS 481
           S +EA+LAKEKM+GKLACGRPLVVR ASEK +     +  +  SE  KS L G+S GQ++
Sbjct: 66  SKEEAKLAKEKMHGKLACGRPLVVRLASEKLMTNTTNDTSRTASESRKSRLGGSSYGQLT 125

Query: 480 RSXXXXXXXXXXXAME--DEGSSLKKAK 403
           RS           A+E   E SS+KK K
Sbjct: 126 RSDKIAAIKNKLRALEGGGESSSVKKPK 153