BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023499
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42470.1| unknown [Lotus japonicus]                              164   9e-39
ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, ...   164   1e-38
ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, ...   164   1e-38
gb|ACU23891.1| unknown [Glycine max]                                  161   7e-38
ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...   160   9e-38

>gb|AFK42470.1| unknown [Lotus japonicus]
          Length = 259

 Score =  164 bits (415), Expect = 9e-39
 Identities = 73/78 (93%), Positives = 76/78 (97%)
 Frame = +1

Query: 4   PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFMGFWFQAIYTGERPIENL 183
           PDVGYPGG WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAF+GFWFQAIYTG+ PIENL
Sbjct: 181 PDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGQGPIENL 240

Query: 184 MAHIADPGHCNIFSAFTS 237
           MAH+ADPGHCNIFSAFTS
Sbjct: 241 MAHLADPGHCNIFSAFTS 258


>ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  164 bits (414), Expect = 1e-38
 Identities = 73/77 (94%), Positives = 75/77 (97%)
 Frame = +1

Query: 4   PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFMGFWFQAIYTGERPIENL 183
           PDVGYPGG WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAF+GFWFQAIYTGE PIENL
Sbjct: 183 PDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENL 242

Query: 184 MAHIADPGHCNIFSAFT 234
           MAH+ADPGHCNIFSAFT
Sbjct: 243 MAHLADPGHCNIFSAFT 259


>ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  164 bits (414), Expect = 1e-38
 Identities = 73/77 (94%), Positives = 75/77 (97%)
 Frame = +1

Query: 4   PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFMGFWFQAIYTGERPIENL 183
           PDVGYPGG WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAF+GFWFQAIYTGE PIENL
Sbjct: 183 PDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENL 242

Query: 184 MAHIADPGHCNIFSAFT 234
           MAH+ADPGHCNIFSAFT
Sbjct: 243 MAHLADPGHCNIFSAFT 259


>gb|ACU23891.1| unknown [Glycine max]
          Length = 260

 Score =  161 bits (407), Expect = 7e-38
 Identities = 72/77 (93%), Positives = 74/77 (96%)
 Frame = +1

Query: 4   PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFMGFWFQAIYTGERPIENL 183
           PDVGYPGG WFDPMMWGRGSPEPVMVLRTKEIKNG LAMLAF+GFWFQAIYTGE PIENL
Sbjct: 183 PDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGGLAMLAFVGFWFQAIYTGEGPIENL 242

Query: 184 MAHIADPGHCNIFSAFT 234
           MAH+ADPGHCNIFSAFT
Sbjct: 243 MAHLADPGHCNIFSAFT 259


>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
           gi|222833488|gb|EEE71965.1| light-harvesting complex I
           protein Lhca6 [Populus trichocarpa]
          Length = 261

 Score =  160 bits (406), Expect = 9e-38
 Identities = 71/79 (89%), Positives = 74/79 (93%)
 Frame = +1

Query: 4   PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFMGFWFQAIYTGERPIENL 183
           PDVGYPGG WFDP  WGRGSPEPVM +RTKEIKNGRLAMLAF+GFWFQAIYTGE PI+NL
Sbjct: 183 PDVGYPGGLWFDPWNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNL 242

Query: 184 MAHIADPGHCNIFSAFTSH 240
           MAHIADPGHCNIFSAFTSH
Sbjct: 243 MAHIADPGHCNIFSAFTSH 261