BLASTX nr result

ID: Coptis23_contig00023495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023495
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868069.1| hypothetical protein ARALYDRAFT_493135 [Arab...   151   5e-35
ref|NP_193473.1| O-fucosyltransferase family protein [Arabidopsi...   147   1e-33
ref|XP_002521236.1| conserved hypothetical protein [Ricinus comm...   143   1e-32
ref|XP_002272057.2| PREDICTED: uncharacterized protein LOC100266...   139   3e-31
emb|CBI29499.3| unnamed protein product [Vitis vinifera]              139   3e-31

>ref|XP_002868069.1| hypothetical protein ARALYDRAFT_493135 [Arabidopsis lyrata subsp.
           lyrata] gi|297313905|gb|EFH44328.1| hypothetical protein
           ARALYDRAFT_493135 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/118 (59%), Positives = 89/118 (75%), Gaps = 9/118 (7%)
 Frame = +2

Query: 2   LFLISIFFLISYTQISKLLFPNSLNSPIPQFPQCK---------GEKFIWFAPHSGFSNQ 154
           +F + +FF I+Y+++ K LF  S  S   QFPQC+         G+KF+W+APHSGFSNQ
Sbjct: 37  VFFVVVFFFITYSEMPKSLFSISAFSGSVQFPQCRSEILTRTLLGQKFLWYAPHSGFSNQ 96

Query: 155 LSELKNAILMASILNRTLIVPPVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQ 328
           LSE KNA+LMA ILNRTLI+PP++DHHAV LGSCPKFRVL P E+R+ VW H IEL++
Sbjct: 97  LSEFKNAVLMAGILNRTLIIPPILDHHAVALGSCPKFRVLSPSEIRISVWNHSIELLR 154


>ref|NP_193473.1| O-fucosyltransferase family protein [Arabidopsis thaliana]
           gi|95147298|gb|ABF57284.1| At4g17430 [Arabidopsis
           thaliana] gi|332658490|gb|AEE83890.1|
           O-fucosyltransferase family protein [Arabidopsis
           thaliana]
          Length = 507

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/118 (60%), Positives = 89/118 (75%), Gaps = 9/118 (7%)
 Frame = +2

Query: 2   LFLISIFFLISYTQISKLLFPNSLNSPIPQFPQCK---------GEKFIWFAPHSGFSNQ 154
           +F I +FF I+Y+++ K LF  S  S   QFPQC+         G+KF+W+APHSGFSNQ
Sbjct: 37  VFFIVVFF-ITYSEMPKSLFSISAFSGSVQFPQCRSEILTRTLLGQKFLWYAPHSGFSNQ 95

Query: 155 LSELKNAILMASILNRTLIVPPVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQ 328
           LSE KNA+LMA ILNRTLI+PP++DHHAV LGSCPKFRVL P E+R+ VW H IEL++
Sbjct: 96  LSEFKNALLMAGILNRTLIIPPILDHHAVALGSCPKFRVLSPSEIRISVWNHSIELLK 153


>ref|XP_002521236.1| conserved hypothetical protein [Ricinus communis]
           gi|223539504|gb|EEF41092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   LFLISIFFLISYTQISKLLFPNSLNSPIPQFPQCK----GEKFIWFAPHSGFSNQLSELK 169
           LF+  +FF  SYT+ SK +  N+L+S I Q  + +    GEKF+W+APHSGFSNQLSE K
Sbjct: 38  LFIFLVFFT-SYTKTSKPILQNTLDSQISQCSRFQSLTGGEKFLWYAPHSGFSNQLSEFK 96

Query: 170 NAILMASILNRTLIVPPVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQ 328
           NAILMA ILNRTLIVPP++DHHAV LGSCPK RVL P ++R+ VW H IEL++
Sbjct: 97  NAILMAGILNRTLIVPPILDHHAVALGSCPKLRVLGPKDIRISVWNHAIELVK 149


>ref|XP_002272057.2| PREDICTED: uncharacterized protein LOC100266043 [Vitis vinifera]
          Length = 482

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/114 (60%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
 Frame = +2

Query: 2   LFLISIFFLISYTQISKLLFPNSLNSPIPQFPQCK-----GEKFIWFAPHSGFSNQLSEL 166
           L  I IF  +SYT       PNSL  PI +  QC      G++F+W+APHSGFSNQ+SE 
Sbjct: 27  LIFIFIFIFVSYTSH----IPNSL-LPISRTSQCTPQNLPGQRFLWYAPHSGFSNQVSEF 81

Query: 167 KNAILMASILNRTLIVPPVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQ 328
           KNAILMA+ILNRTL+VPP++DHHAV LGSCPKFRVL P E+R+ VW HVI+L++
Sbjct: 82  KNAILMAAILNRTLVVPPILDHHAVALGSCPKFRVLGPGEIRLSVWNHVIDLLR 135


>emb|CBI29499.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/114 (60%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
 Frame = +2

Query: 2   LFLISIFFLISYTQISKLLFPNSLNSPIPQFPQCK-----GEKFIWFAPHSGFSNQLSEL 166
           L  I IF  +SYT       PNSL  PI +  QC      G++F+W+APHSGFSNQ+SE 
Sbjct: 27  LIFIFIFIFVSYTSH----IPNSL-LPISRTSQCTPQNLPGQRFLWYAPHSGFSNQVSEF 81

Query: 167 KNAILMASILNRTLIVPPVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQ 328
           KNAILMA+ILNRTL+VPP++DHHAV LGSCPKFRVL P E+R+ VW HVI+L++
Sbjct: 82  KNAILMAAILNRTLVVPPILDHHAVALGSCPKFRVLGPGEIRLSVWNHVIDLLR 135


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