BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023493
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20322.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002527601.1| pentatricopeptide repeat-containing protein,...    83   2e-14

>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 AEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAVRCIKMAFSV-NKNGGWKPNPKVI 24
           AE+ML D+ E+GK P PNSW IVAAGY++K  MEKA  C+K A +V  +N GW+P PKVI
Sbjct: 367 AESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVI 426

Query: 23  SSILSWI 3
           SSILSW+
Sbjct: 427 SSILSWL 433


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 AEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAVRCIKMAFSV-NKNGGWKPNPKVI 24
           AE+ML D+ E+GK P PNSW IVAAGY++K  MEKA  C+K A +V  +N GW+P PKVI
Sbjct: 367 AESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVI 426

Query: 23  SSILSWI 3
           SSILSW+
Sbjct: 427 SSILSWL 433


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 AEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAVRCIKMAFSVN-KNGGWKPNPKVI 24
           AEAML++L EKGKI  PNSWG VA+GY+ + EMEKAV C+K A S++  N G KPN +VI
Sbjct: 370 AEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVI 429

Query: 23  SSILSWI 3
           + ILSW+
Sbjct: 430 AGILSWL 436


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 AEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAVRCIKMAFSVN-KNGGWKPNPKVI 24
           A+A+LE+LTEKGK+ +PNSWGIVAAG+  K+E+ KA  C+K A  +  +N GWKPN +VI
Sbjct: 360 AKALLENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYVENKGWKPNQRVI 419

Query: 23  SSILSWI 3
           + ILSW+
Sbjct: 420 NGILSWL 426


>ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533018|gb|EEF34782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 AEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAVRCIKMAFSVN-KNGGWKPNPKVI 24
           AEAML+D+ +K K P PNSW I+AAGYV K  MEKA  C+K A +V  +N GW+P   +I
Sbjct: 365 AEAMLKDIVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKANLI 424

Query: 23  SSILSWI 3
           SSILSW+
Sbjct: 425 SSILSWL 431