BLASTX nr result

ID: Coptis23_contig00023490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023490
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83615.1| hypothetical protein VITISV_011368 [Vitis vinifera]    55   5e-06
emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera]    55   6e-06
emb|CAN68701.1| hypothetical protein VITISV_026014 [Vitis vinifera]    55   8e-06

>emb|CAN83615.1| hypothetical protein VITISV_011368 [Vitis vinifera]
          Length = 450

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/83 (36%), Positives = 45/83 (54%)
 Frame = +2

Query: 110 REWWKVIKSLDEFVHIRDSILYTPLGILVDVDYEKADWAVVIALVERWWNTTHTFHFPCT 289
           REW      LD+   +R  I+ +   +   V + K DW ++ AL+E+W   THTFH P  
Sbjct: 276 REW-----VLDD--RVRPYIIQSGFYVFHRVGHVKVDWPLITALLEKWCPKTHTFHMPVG 328

Query: 290 ELEFTLLDFTMIFGLSIGIGQPI 358
           E+  TL D  ++FGL +  G P+
Sbjct: 329 EMTITLQDVAILFGLRVH-GHPV 350


>emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera]
          Length = 1349

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +2

Query: 200 VDYEKADWAVVIALVERWWNTTHTFHFPCTELEFTLLDFTMIFGLSIGIGQPI 358
           V + K DW ++ ALVERW   THTFH P  E+  TL D  ++FGL +  G P+
Sbjct: 815 VGHVKVDWPLITALVERWRPETHTFHMPVGEMTITLQDVAILFGLRVH-GHPV 866


>emb|CAN68701.1| hypothetical protein VITISV_026014 [Vitis vinifera]
          Length = 576

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/68 (36%), Positives = 40/68 (58%)
 Frame = +2

Query: 155 IRDSILYTPLGILVDVDYEKADWAVVIALVERWWNTTHTFHFPCTELEFTLLDFTMIFGL 334
           ++  I+ + L +   + + K DW ++ AL+ERW   THTFH P  E+  TL D  ++FGL
Sbjct: 359 VQPYIIQSGLYVFHRMGHVKVDWPLITALLERWCPKTHTFHMPVGEMTITLQDVVILFGL 418

Query: 335 SIGIGQPI 358
            +  G P+
Sbjct: 419 RVH-GHPV 425


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