BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023479
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26526.3| unnamed protein product [Vitis vinifera]              157   7e-37
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi...   157   7e-37
ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
ref|XP_002520026.1| pentatricopeptide repeat-containing protein,...   145   3e-33

>emb|CBI26526.3| unnamed protein product [Vitis vinifera]
          Length = 1005

 Score =  157 bits (398), Expect = 7e-37
 Identities = 80/117 (68%), Positives = 97/117 (82%), Gaps = 2/117 (1%)
 Frame = +1

Query: 1    GRGRKLNKAIEMFNLASSSDV--SMDEKAYTTMISYYGKAGRSQEASLLFIKMREEGIRP 174
            GRGRKL+KA+EMFN A  S V  S+DEK YT +ISYYGKAG+S EASLLF +M+EEGI+P
Sbjct: 759  GRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKP 818

Query: 175  GKVTYNIMMNMYASAALDDKAEKLLQAMEKDGCSPDSFTYQALIRAYTVCEKFLKAE 345
            GKV+YNIM+N+YA+A L  +A++L QAM +DGCSPDS TY ALIRAYT   KFL+AE
Sbjct: 819  GKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAE 875


>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
            [Vitis vinifera]
          Length = 1071

 Score =  157 bits (398), Expect = 7e-37
 Identities = 80/117 (68%), Positives = 97/117 (82%), Gaps = 2/117 (1%)
 Frame = +1

Query: 1    GRGRKLNKAIEMFNLASSSDV--SMDEKAYTTMISYYGKAGRSQEASLLFIKMREEGIRP 174
            GRGRKL+KA+EMFN A  S V  S+DEK YT +ISYYGKAG+S EASLLF +M+EEGI+P
Sbjct: 825  GRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKP 884

Query: 175  GKVTYNIMMNMYASAALDDKAEKLLQAMEKDGCSPDSFTYQALIRAYTVCEKFLKAE 345
            GKV+YNIM+N+YA+A L  +A++L QAM +DGCSPDS TY ALIRAYT   KFL+AE
Sbjct: 885  GKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAE 941


>ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|222862256|gb|EEE99762.1|
            predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/115 (60%), Positives = 91/115 (79%)
 Frame = +1

Query: 1    GRGRKLNKAIEMFNLASSSDVSMDEKAYTTMISYYGKAGRSQEASLLFIKMREEGIRPGK 180
            GRGRKL+KA+E+FN A SS VS+DEKAY  MI+YYGKAG+  EASLLF KM+EEGI+PG 
Sbjct: 815  GRGRKLDKAVEVFNTACSSGVSLDEKAYMNMINYYGKAGKRHEASLLFAKMQEEGIKPGV 874

Query: 181  VTYNIMMNMYASAALDDKAEKLLQAMEKDGCSPDSFTYQALIRAYTVCEKFLKAE 345
            V+YN+M  +YA + L  + E+L + ME+DGC PDSFTY +L++AY+   K L+AE
Sbjct: 875  VSYNVMAKVYAMSGLYHEVEELFKVMERDGCPPDSFTYLSLVQAYSESSKCLEAE 929


>ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
            [Cucumis sativus]
          Length = 1062

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/115 (63%), Positives = 93/115 (80%)
 Frame = +1

Query: 1    GRGRKLNKAIEMFNLASSSDVSMDEKAYTTMISYYGKAGRSQEASLLFIKMREEGIRPGK 180
            GRGRKL+KA+EMFN A SS +S DEKAYT +IS YGKAG++ EASLLF +M EEG++PG 
Sbjct: 819  GRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGM 878

Query: 181  VTYNIMMNMYASAALDDKAEKLLQAMEKDGCSPDSFTYQALIRAYTVCEKFLKAE 345
            V+YNIM+N+YA+A L ++ E LL+AME+D   PDSFTY +LIRAYT   K+ +AE
Sbjct: 879  VSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAE 933


>ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540790|gb|EEF42350.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1040

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/115 (60%), Positives = 92/115 (80%)
 Frame = +1

Query: 1    GRGRKLNKAIEMFNLASSSDVSMDEKAYTTMISYYGKAGRSQEASLLFIKMREEGIRPGK 180
            GRG KL+KA+E+FN A SS VS+DEKAY  M+SYYGKAG+  EASLLF KM+EEGI+PGK
Sbjct: 768  GRGEKLDKAVEIFNTACSSGVSLDEKAYMNMVSYYGKAGKRNEASLLFTKMQEEGIKPGK 827

Query: 181  VTYNIMMNMYASAALDDKAEKLLQAMEKDGCSPDSFTYQALIRAYTVCEKFLKAE 345
            V+YNIM+ ++A A L  +A++L  AM++DG  PDSFTY +L++AYT   K+ +AE
Sbjct: 828  VSYNIMIKVFAIAGLYHEAKELFHAMQRDGWPPDSFTYLSLVQAYTESLKYSEAE 882