BLASTX nr result
ID: Coptis23_contig00023477
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00023477
(930 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera] 103 4e-21
emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera] 99 1e-19
emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera] 90 2e-19
emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera] 99 3e-19
emb|CAN62318.1| hypothetical protein VITISV_026527 [Vitis vinifera] 97 9e-19
>emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]
Length = 1726
Score = 103 bits (256), Expect(2) = 4e-21
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Frame = -1
Query: 699 KRLKW*RSNILILLEVWK-HPWQFLHFPSMGL*GGNLFA*NSHIVEVNDHLFGAFYLSVE 523
KR W R + VWK ++ P+ G GG + +S ++ + G F ++V+
Sbjct: 761 KREIWDRRXVS---SVWKGKSLDWVALPACGASGGIVILWDSXKFXCSEKVLGXFSVTVK 817
Query: 522 CSLKTIGFVWLMTGVYDPNKDGVRAQFFEELEDVRAWSELPWCLGGEFNRITFRHERTGR 343
+ GF WL T VY PNK R F+ EL+D+ + WC+GG+FN I ER G
Sbjct: 818 LNSXEEGFFWL-TSVYGPNKAVXRKDFWMELQDLHGLTSPRWCVGGDFNVIKRMSERMGD 876
Query: 342 SSITKYMQIFDDFVSNNSLVDYPMNNALHTWSNRKG---LSRIGRSLASTDWDAHYPQA 175
S +T M+ FD+F+ + L+D P+ NA TWSN + R+ R L S++WD+ + Q+
Sbjct: 877 SRLTVNMRCFDEFIKESGLLDPPLRNAAFTWSNMQVDPICKRLDRFLFSSEWDSFFSQS 935
Score = 25.0 bits (53), Expect(2) = 4e-21
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 745 IRLLRSTHNPTIFLLQETK 689
+R ST NP + +LQETK
Sbjct: 743 VRRFLSTQNPDVVMLQETK 761
>emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]
Length = 1198
Score = 99.4 bits (246), Expect(2) = 1e-19
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Frame = -1
Query: 699 KRLKW*RSNILILLEVWK-HPWQFLHFPSMGL*GGNLFA*NSHIVEVNDHLFGAFYLSVE 523
KR W R ++ VWK ++ P+ G GG + +S + + G+F ++V+
Sbjct: 674 KREIWDRRSVS---SVWKGKSLDWVALPACGASGGIVILWDSXKFXCSXKVLGSFSVTVK 730
Query: 522 CSLKTIGFVWLMTGVYDPNKDGVRAQFFEELEDVRAWSELPWCLGGEFNRITFRHERTGR 343
+ GF WL T VY PNK R F+ EL+D+ + WC+GG+FN I E+ G
Sbjct: 731 LNSDEEGFFWL-TSVYGPNKAVWRKDFWMELQDLHGLTFPRWCVGGDFNVIRRISEKMGD 789
Query: 342 SSITKYMQIFDDFVSNNSLVDYPMNNALHTWSNRKG---LSRIGRSLASTDWDAHYPQA 175
S +T M+ FD+F+ + L+D P+ NA TWSN + R+ R L S++WD+ + Q+
Sbjct: 790 SRLTVNMRCFDEFIRESGLLDPPLRNAAFTWSNMQVDPICKRLDRFLFSSEWDSFFSQS 848
Score = 23.9 bits (50), Expect(2) = 1e-19
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 742 RLLRSTHNPTIFLLQETK 689
R ST NP + +LQETK
Sbjct: 657 RRFLSTQNPDVVMLQETK 674
>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
Length = 1971
Score = 89.7 bits (221), Expect(2) = 2e-19
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Frame = -1
Query: 612 GL*GGNLFA*NSHIVEVNDHLFGAFYLSVECSLKTI--GFVWLMTGVYDPNKDGVRAQFF 439
G GG L + ++E+ G F S+ C K GF W+ +GVY P R F+
Sbjct: 370 GAAGGVLVFWDKRVLELEGMEVGLF--SISCRFKNCEDGFNWVFSGVYGPTLKRYRELFW 427
Query: 438 EELEDVRA-WSELPWCLGGEFNRITFRHERTGRSSITKYMQIFDDFVSNNSLVDYPMNNA 262
EEL +R WS+ PWC+GG+FN I F +E ++ M+ F + + + L D P+
Sbjct: 428 EELRAIRRLWSD-PWCIGGDFNLIRFPNESRRGGRLSSSMRRFSEVIDDLDLRDLPLQGG 486
Query: 261 LHTWS---NRKGLSRIGRSLASTDWDAHY 184
TWS N + ++RI R L S DW+ H+
Sbjct: 487 PFTWSGGLNNQAMTRIDRFLVSEDWEGHF 515
Score = 32.7 bits (73), Expect(2) = 2e-19
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 98 ITVPLELMWFKDSNTVDLIVEWWPSFSFEGT 6
++ E MW K+ DL+ WW S SF G+
Sbjct: 545 VSFXFENMWLKEEGFKDLLKGWWQSLSFNGS 575
>emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]
Length = 1750
Score = 99.4 bits (246), Expect(2) = 3e-19
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Frame = -1
Query: 621 PSMGL*GGNLFA*NSHIVEVNDHLFGAFYLSVECSLKTIGFVWLMTGVYDPNKDGVRAQF 442
P+ G GG L +S I+ + + G+F +SV+ SL G +W+ + VY PN +R F
Sbjct: 697 PASGASGGILIIWDSKILSREEVVIGSFSVSVKFSLDGCGPLWI-SAVYGPNSPSLRKDF 755
Query: 441 FEELEDVRAWSELPWCLGGEFNRITFRHERTGRSSITKYMQIFDDFVSNNSLVDYPMNNA 262
+ EL D+ + WC+GG+FN I E+ G SS+T M+ FD F+S L+D P+ NA
Sbjct: 756 WVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNA 815
Query: 261 LHTWSNRKG---LSRIGRSLASTDWDAHYPQ 178
TWSN + R+ R L S +W +PQ
Sbjct: 816 SFTWSNMQESPVCKRLDRFLYSNEWGLLFPQ 846
Score = 22.3 bits (46), Expect(2) = 3e-19
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 83 ELMWFKDSNTVDLIVEWWPSF 21
E MW + +N + +WW F
Sbjct: 879 ENMWLQHTNFKENFRDWWSGF 899
>emb|CAN62318.1| hypothetical protein VITISV_026527 [Vitis vinifera]
Length = 1141
Score = 96.7 bits (239), Expect(2) = 9e-19
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Frame = -1
Query: 621 PSMGL*GGNLFA*NSHIVEVNDHLFGAFYLSVECSLKTIGFVWLMTGVYDPNKDGVRAQF 442
P G GG L +S + + + G+F +SV+ SL G +W+ + VY PN +R F
Sbjct: 62 PVSGASGGILIIWDSKNLRREEVVIGSFSISVKFSLDGCGPLWI-SAVYGPNSPSLRKDF 120
Query: 441 FEELEDVRAWSELPWCLGGEFNRITFRHERTGRSSITKYMQIFDDFVSNNSLVDYPMNNA 262
+ EL D+ + L WC+GG+FN I E+ G SS+T M+ FD F+ L+D P+ NA
Sbjct: 121 WVELFDIYGLTYLLWCVGGDFNVIRRSSEKLGGSSLTPSMRDFDSFIRECELLDPPLRNA 180
Query: 261 LHTWSNRKG---LSRIGRSLASTDWDAHYPQ 178
TWSN + R+ R L S +W +PQ
Sbjct: 181 SFTWSNMQESPVCKRLDRFLYSNEWGLLFPQ 211
Score = 23.5 bits (49), Expect(2) = 9e-19
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -2
Query: 83 ELMWFKDSNTVDLIVEWWPSFSFEG 9
E MW + +N + +WW F G
Sbjct: 244 ENMWLQHTNFKENFRDWWSGFQGNG 268