BLASTX nr result

ID: Coptis23_contig00023460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023460
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36841.3| unnamed protein product [Vitis vinifera]              221   4e-56
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   221   4e-56
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   220   8e-56
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   217   9e-55
ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4...   216   1e-54

>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  221 bits (564), Expect = 4e-56
 Identities = 110/137 (80%), Positives = 122/137 (89%)
 Frame = +3

Query: 66  LGSVFLTPDQVRVYGTTAYVAQTSWIQSGTIQENILFGLAMDMEKYREVIRVCLLDLDLE 245
           LG +     QVR+ GTTAYVAQTSWIQ+GTIQENILFGL M+ EKYREVIRVC L+ DLE
Sbjct: 262 LGEMHKISGQVRLCGTTAYVAQTSWIQNGTIQENILFGLPMNTEKYREVIRVCCLEKDLE 321

Query: 246 MMEFGDQTEIGERGINLSGGQKQRIQLMRAVYQDCDIYLLDDVFSAVYAHTGSELFKERA 425
           MME+GDQTEIGERGINLSGGQKQRIQL RAVYQDCD+YLLDDVFSAV AHTG+++FKE  
Sbjct: 322 MMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECV 381

Query: 426 RGALKNKTILLVTHQVE 476
           RGAL+NKTILLVTHQV+
Sbjct: 382 RGALRNKTILLVTHQVD 398


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  221 bits (564), Expect = 4e-56
 Identities = 110/137 (80%), Positives = 122/137 (89%)
 Frame = +3

Query: 66   LGSVFLTPDQVRVYGTTAYVAQTSWIQSGTIQENILFGLAMDMEKYREVIRVCLLDLDLE 245
            LG +     QVR+ GTTAYVAQTSWIQ+GTIQENILFGL M+ EKYREVIRVC L+ DLE
Sbjct: 692  LGEMHKISGQVRLCGTTAYVAQTSWIQNGTIQENILFGLPMNTEKYREVIRVCCLEKDLE 751

Query: 246  MMEFGDQTEIGERGINLSGGQKQRIQLMRAVYQDCDIYLLDDVFSAVYAHTGSELFKERA 425
            MME+GDQTEIGERGINLSGGQKQRIQL RAVYQDCD+YLLDDVFSAV AHTG+++FKE  
Sbjct: 752  MMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECV 811

Query: 426  RGALKNKTILLVTHQVE 476
            RGAL+NKTILLVTHQV+
Sbjct: 812  RGALRNKTILLVTHQVD 828


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  220 bits (561), Expect = 8e-56
 Identities = 111/137 (81%), Positives = 120/137 (87%)
 Frame = +3

Query: 66   LGSVFLTPDQVRVYGTTAYVAQTSWIQSGTIQENILFGLAMDMEKYREVIRVCLLDLDLE 245
            LG +     +VRV GTTAYVAQTSWIQ+GTIQENILFGL MD EKY EVIRVC L+ DLE
Sbjct: 690  LGEMHKISGKVRVCGTTAYVAQTSWIQNGTIQENILFGLPMDREKYNEVIRVCCLEKDLE 749

Query: 246  MMEFGDQTEIGERGINLSGGQKQRIQLMRAVYQDCDIYLLDDVFSAVYAHTGSELFKERA 425
            MM++GDQTEIGERGINLSGGQKQRIQL RAVYQDCDIYLLDDVFSAV AHTGS++FKE  
Sbjct: 750  MMDYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECV 809

Query: 426  RGALKNKTILLVTHQVE 476
            RGALK KTILLVTHQV+
Sbjct: 810  RGALKGKTILLVTHQVD 826


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1508

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/137 (79%), Positives = 120/137 (87%)
 Frame = +3

Query: 66   LGSVFLTPDQVRVYGTTAYVAQTSWIQSGTIQENILFGLAMDMEKYREVIRVCLLDLDLE 245
            LG +     +VRV GTTAYVAQTSWIQ+ TI+ENILFGL M+ EKY+EVIRVC L+ DLE
Sbjct: 692  LGEMHKISGKVRVCGTTAYVAQTSWIQNSTIEENILFGLPMNREKYKEVIRVCCLEKDLE 751

Query: 246  MMEFGDQTEIGERGINLSGGQKQRIQLMRAVYQDCDIYLLDDVFSAVYAHTGSELFKERA 425
            MMEFGDQTEIGERGINLSGGQKQRIQL RAVYQDCDIYLLDDVFSAV AHTG+++FKE  
Sbjct: 752  MMEFGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGTDIFKECV 811

Query: 426  RGALKNKTILLVTHQVE 476
            RGALK KTILLVTHQV+
Sbjct: 812  RGALKGKTILLVTHQVD 828


>ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
            gi|449484283|ref|XP_004156839.1| PREDICTED: ABC
            transporter C family member 4-like [Cucumis sativus]
          Length = 1507

 Score =  216 bits (551), Expect = 1e-54
 Identities = 107/137 (78%), Positives = 119/137 (86%)
 Frame = +3

Query: 66   LGSVFLTPDQVRVYGTTAYVAQTSWIQSGTIQENILFGLAMDMEKYREVIRVCLLDLDLE 245
            LG +     +V V GTTAYVAQTSWIQ+GTI+ENILFGL MD E+YREV+R+C L  DLE
Sbjct: 693  LGEMHKLSGKVHVCGTTAYVAQTSWIQNGTIEENILFGLPMDRERYREVVRICCLVKDLE 752

Query: 246  MMEFGDQTEIGERGINLSGGQKQRIQLMRAVYQDCDIYLLDDVFSAVYAHTGSELFKERA 425
            MME+GDQTEIGERGINLSGGQKQRIQL RAVYQDCDIYLLDDVFSAV AHTGSE+FKE  
Sbjct: 753  MMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECV 812

Query: 426  RGALKNKTILLVTHQVE 476
            RGALK KT++LVTHQV+
Sbjct: 813  RGALKGKTVILVTHQVD 829


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