BLASTX nr result

ID: Coptis23_contig00023459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023459
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867118.1| hypothetical protein ARALYDRAFT_912943 [Arab...    81   1e-13
ref|NP_001176525.1| Os11g0456300 [Oryza sativa Japonica Group] g...    80   2e-13
ref|XP_003577587.1| PREDICTED: SKP1-like protein 1B-like isoform...    80   2e-13
ref|XP_003573487.1| PREDICTED: SKP1-like protein 1B-like isoform...    80   2e-13
ref|XP_003573486.1| PREDICTED: SKP1-like protein 1B-like isoform...    80   2e-13

>ref|XP_002867118.1| hypothetical protein ARALYDRAFT_912943 [Arabidopsis lyrata subsp.
           lyrata] gi|297312954|gb|EFH43377.1| hypothetical protein
           ARALYDRAFT_912943 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127
           QT+ADMIKGK PEEIR LF+IKNDFTPEEEEE+R+ENQWAFE
Sbjct: 111 QTIADMIKGKNPEEIRTLFNIKNDFTPEEEEEVRRENQWAFE 152


>ref|NP_001176525.1| Os11g0456300 [Oryza sativa Japonica Group]
           gi|77550711|gb|ABA93508.1| SKP1-like protein 1B,
           putative, expressed [Oryza sativa Japonica Group]
           gi|255680071|dbj|BAH95253.1| Os11g0456300 [Oryza sativa
           Japonica Group]
          Length = 173

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127
           QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE
Sbjct: 132 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173


>ref|XP_003577587.1| PREDICTED: SKP1-like protein 1B-like isoform 1 [Brachypodium
           distachyon] gi|357156824|ref|XP_003577588.1| PREDICTED:
           SKP1-like protein 1B-like isoform 2 [Brachypodium
           distachyon]
          Length = 181

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127
           QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE
Sbjct: 140 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 181


>ref|XP_003573487.1| PREDICTED: SKP1-like protein 1B-like isoform 2 [Brachypodium
           distachyon]
          Length = 157

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127
           QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE
Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 157


>ref|XP_003573486.1| PREDICTED: SKP1-like protein 1B-like isoform 1 [Brachypodium
           distachyon]
          Length = 168

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127
           QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE
Sbjct: 127 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 168


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