BLASTX nr result
ID: Coptis23_contig00023459
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00023459 (205 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002867118.1| hypothetical protein ARALYDRAFT_912943 [Arab... 81 1e-13 ref|NP_001176525.1| Os11g0456300 [Oryza sativa Japonica Group] g... 80 2e-13 ref|XP_003577587.1| PREDICTED: SKP1-like protein 1B-like isoform... 80 2e-13 ref|XP_003573487.1| PREDICTED: SKP1-like protein 1B-like isoform... 80 2e-13 ref|XP_003573486.1| PREDICTED: SKP1-like protein 1B-like isoform... 80 2e-13 >ref|XP_002867118.1| hypothetical protein ARALYDRAFT_912943 [Arabidopsis lyrata subsp. lyrata] gi|297312954|gb|EFH43377.1| hypothetical protein ARALYDRAFT_912943 [Arabidopsis lyrata subsp. lyrata] Length = 152 Score = 80.9 bits (198), Expect = 1e-13 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +2 Query: 2 QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127 QT+ADMIKGK PEEIR LF+IKNDFTPEEEEE+R+ENQWAFE Sbjct: 111 QTIADMIKGKNPEEIRTLFNIKNDFTPEEEEEVRRENQWAFE 152 >ref|NP_001176525.1| Os11g0456300 [Oryza sativa Japonica Group] gi|77550711|gb|ABA93508.1| SKP1-like protein 1B, putative, expressed [Oryza sativa Japonica Group] gi|255680071|dbj|BAH95253.1| Os11g0456300 [Oryza sativa Japonica Group] Length = 173 Score = 80.1 bits (196), Expect = 2e-13 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +2 Query: 2 QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127 QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE Sbjct: 132 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173 >ref|XP_003577587.1| PREDICTED: SKP1-like protein 1B-like isoform 1 [Brachypodium distachyon] gi|357156824|ref|XP_003577588.1| PREDICTED: SKP1-like protein 1B-like isoform 2 [Brachypodium distachyon] Length = 181 Score = 80.1 bits (196), Expect = 2e-13 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +2 Query: 2 QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127 QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE Sbjct: 140 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 181 >ref|XP_003573487.1| PREDICTED: SKP1-like protein 1B-like isoform 2 [Brachypodium distachyon] Length = 157 Score = 80.1 bits (196), Expect = 2e-13 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +2 Query: 2 QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127 QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 157 >ref|XP_003573486.1| PREDICTED: SKP1-like protein 1B-like isoform 1 [Brachypodium distachyon] Length = 168 Score = 80.1 bits (196), Expect = 2e-13 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +2 Query: 2 QTVADMIKGKKPEEIRELFSIKNDFTPEEEEELRKENQWAFE 127 QTVADMIKGK PEEIR+ F+IKNDFTPEEEEE+R+ENQWAFE Sbjct: 127 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 168