BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023455
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285757.1| PREDICTED: uncharacterized protein LOC100265...   338   2e-90
emb|CBI16564.3| unnamed protein product [Vitis vinifera]              316   1e-83
ref|XP_002303980.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83
emb|CAA18233.1| putative protein [Arabidopsis thaliana] gi|72694...   311   3e-82
ref|NP_567745.1| antitermination NusB domain-containing protein ...   310   6e-82

>ref|XP_002285757.1| PREDICTED: uncharacterized protein LOC100265613 [Vitis vinifera]
          Length = 288

 Score =  338 bits (867), Expect = 2e-90
 Identities = 183/279 (65%), Positives = 212/279 (75%), Gaps = 1/279 (0%)
 Frame = -2

Query: 1313 MEGASVL-SFNSTKPNINFTFFNSHSPYQHTQLVGFQYNHKKWSKKRVFLLTPRSSLLTP 1137
            M+  S+L S NS+KP+  F F +S S    T L      + K       L +PR+SL T 
Sbjct: 1    MDANSLLCSSNSSKPHFIFNFNHSSSCQFLTPLPTKLLINSK------LLSSPRTSLRTS 54

Query: 1136 ALVVAETIEKVTDTSSSSKDGLPKIDKSGRFCSPRAARELALSIAYASCLEGSDPVRLFE 957
            AL    T+EK  D  S  ++ LP+IDKSGRFCSPRAARELAL IAYA+CLEGSDPVRLFE
Sbjct: 55   AL----TVEKPLDKPSEPREMLPRIDKSGRFCSPRAARELALLIAYAACLEGSDPVRLFE 110

Query: 956  KRLNARREPGYEFNKSTLLEYNHMNFAGDPVSTQTXXXXXXXXXXXXXESAIEAEVLSAP 777
            +R+NARREPGYEF+K +LLEYNHM+F G PV+T+T             ESAIEAEVLSAP
Sbjct: 111  RRMNARREPGYEFDKDSLLEYNHMSFGGPPVTTETVEEADELLRNNEKESAIEAEVLSAP 170

Query: 776  PKLVYSKLILRLTKKMLVAVMQGWDKHVVVIDKVAPQNWKDEPAGRILEFCILHLAMTEI 597
            PKLVY KLILR T+K+LVAV+  W+ HV+VIDKVAP NWK+EPAGRILE CILHLAM+EI
Sbjct: 171  PKLVYGKLILRFTRKLLVAVVDKWNSHVLVIDKVAPPNWKNEPAGRILELCILHLAMSEI 230

Query: 596  AILGTRHQIVINEAVDLAKRFCDGTAPRIINGCLRTFVR 480
            A+LGTRHQIVINEAVDLAKRFCDG APRIINGCLRTFV+
Sbjct: 231  AVLGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVK 269


>emb|CBI16564.3| unnamed protein product [Vitis vinifera]
          Length = 218

 Score =  316 bits (809), Expect = 1e-83
 Identities = 155/198 (78%), Positives = 173/198 (87%)
 Frame = -2

Query: 1073 LPKIDKSGRFCSPRAARELALSIAYASCLEGSDPVRLFEKRLNARREPGYEFNKSTLLEY 894
            LP+IDKSGRFCSPRAARELAL IAYA+CLEGSDPVRLFE+R+NARREPGYEF+K +LLEY
Sbjct: 2    LPRIDKSGRFCSPRAARELALLIAYAACLEGSDPVRLFERRMNARREPGYEFDKDSLLEY 61

Query: 893  NHMNFAGDPVSTQTXXXXXXXXXXXXXESAIEAEVLSAPPKLVYSKLILRLTKKMLVAVM 714
            NHM+F G PV+T+T             ESAIEAEVLSAPPKLVY KLILR T+K+LVAV+
Sbjct: 62   NHMSFGGPPVTTETVEEADELLRNNEKESAIEAEVLSAPPKLVYGKLILRFTRKLLVAVV 121

Query: 713  QGWDKHVVVIDKVAPQNWKDEPAGRILEFCILHLAMTEIAILGTRHQIVINEAVDLAKRF 534
              W+ HV+VIDKVAP NWK+EPAGRILE CILHLAM+EIA+LGTRHQIVINEAVDLAKRF
Sbjct: 122  DKWNSHVLVIDKVAPPNWKNEPAGRILELCILHLAMSEIAVLGTRHQIVINEAVDLAKRF 181

Query: 533  CDGTAPRIINGCLRTFVR 480
            CDG APRIINGCLRTFV+
Sbjct: 182  CDGAAPRIINGCLRTFVK 199


>ref|XP_002303980.1| predicted protein [Populus trichocarpa] gi|222841412|gb|EEE78959.1|
            predicted protein [Populus trichocarpa]
          Length = 218

 Score =  314 bits (805), Expect = 3e-83
 Identities = 151/198 (76%), Positives = 173/198 (87%)
 Frame = -2

Query: 1073 LPKIDKSGRFCSPRAARELALSIAYASCLEGSDPVRLFEKRLNARREPGYEFNKSTLLEY 894
            +PKIDKSGRFCSPRAARELAL I YA+CLEGSDP+RLFEKR+NARREPGYEF+K++LLEY
Sbjct: 2    MPKIDKSGRFCSPRAARELALLIIYAACLEGSDPIRLFEKRMNARREPGYEFDKASLLEY 61

Query: 893  NHMNFAGDPVSTQTXXXXXXXXXXXXXESAIEAEVLSAPPKLVYSKLILRLTKKMLVAVM 714
            NHM+F G PV+T+T             ESAIEAEVLSAPPKLVYSKL+LR T+K+LVAV+
Sbjct: 62   NHMSFGGPPVTTETVEEADELQLSDEKESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVV 121

Query: 713  QGWDKHVVVIDKVAPQNWKDEPAGRILEFCILHLAMTEIAILGTRHQIVINEAVDLAKRF 534
              WD HV+VIDKV+P NWK+EPAGRILEFCILH+AM+EI +LGTRHQIVINEAVDLAKRF
Sbjct: 122  DKWDSHVLVIDKVSPPNWKNEPAGRILEFCILHMAMSEITVLGTRHQIVINEAVDLAKRF 181

Query: 533  CDGTAPRIINGCLRTFVR 480
            CDG  PRIINGCLRTF++
Sbjct: 182  CDGAGPRIINGCLRTFLK 199


>emb|CAA18233.1| putative protein [Arabidopsis thaliana] gi|7269489|emb|CAB79492.1|
            putative protein [Arabidopsis thaliana]
          Length = 286

 Score =  311 bits (796), Expect = 3e-82
 Identities = 174/290 (60%), Positives = 208/290 (71%), Gaps = 3/290 (1%)
 Frame = -2

Query: 1313 MEGA-SVLSFNSTKPNINFTFFNSHSPYQHTQLVGFQYNHKKWSKK--RVFLLTPRSSLL 1143
            MEG  S L  +S + +I FT  +S  P   T LV  +  +K+ S    R+FL   RS+L 
Sbjct: 1    MEGTFSPLCLHSHR-SIGFTLVDSLRP---TNLVSLRTGNKRSSSSSLRLFLSPTRSALR 56

Query: 1142 TPALVVAETIEKVTDTSSSSKDGLPKIDKSGRFCSPRAARELALSIAYASCLEGSDPVRL 963
            TP +    + E+V D        +PKIDKSGR  SPRAARELAL I YA+CLEGSDP+RL
Sbjct: 57   TPTI----SAEEVKDVP------MPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRL 106

Query: 962  FEKRLNARREPGYEFNKSTLLEYNHMNFAGDPVSTQTXXXXXXXXXXXXXESAIEAEVLS 783
            FEKR+NARREPGYEF+KS+LLEYNHM+F G PV T+T             ES IEAEVLS
Sbjct: 107  FEKRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEVLS 166

Query: 782  APPKLVYSKLILRLTKKMLVAVMQGWDKHVVVIDKVAPQNWKDEPAGRILEFCILHLAMT 603
            APPKLVYSKL+LR  KK+L AV+  WD HVV+I+K++P +WK  PAGRILEF ILHLAM+
Sbjct: 167  APPKLVYSKLVLRFAKKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAMS 226

Query: 602  EIAILGTRHQIVINEAVDLAKRFCDGTAPRIINGCLRTFVRIHRESTVVP 453
            E+A+L TRH IVINEAVDLAKRFCDG+APRIINGCLRTFV+  R +T  P
Sbjct: 227  EVAVLETRHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVK-DRATTSTP 275


>ref|NP_567745.1| antitermination NusB domain-containing protein [Arabidopsis thaliana]
            gi|15450968|gb|AAK96755.1| putative protein [Arabidopsis
            thaliana] gi|30984514|gb|AAP42720.1| At4g26370
            [Arabidopsis thaliana] gi|332659789|gb|AEE85189.1|
            antitermination NusB domain-containing protein
            [Arabidopsis thaliana]
          Length = 301

 Score =  310 bits (794), Expect = 6e-82
 Identities = 168/275 (61%), Positives = 200/275 (72%), Gaps = 2/275 (0%)
 Frame = -2

Query: 1271 NINFTFFNSHSPYQHTQLVGFQYNHKKWSKK--RVFLLTPRSSLLTPALVVAETIEKVTD 1098
            +I FT  +S  P   T LV  +  +K+ S    R+FL   RS+L TP +    + E+V D
Sbjct: 30   SIGFTLVDSLRP---TNLVSLRTGNKRSSSSSLRLFLSPTRSALRTPTI----SAEEVKD 82

Query: 1097 TSSSSKDGLPKIDKSGRFCSPRAARELALSIAYASCLEGSDPVRLFEKRLNARREPGYEF 918
                    +PKIDKSGR  SPRAARELAL I YA+CLEGSDP+RLFEKR+NARREPGYEF
Sbjct: 83   VP------MPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRLFEKRINARREPGYEF 136

Query: 917  NKSTLLEYNHMNFAGDPVSTQTXXXXXXXXXXXXXESAIEAEVLSAPPKLVYSKLILRLT 738
            +KS+LLEYNHM+F G PV T+T             ES IEAEVLSAPPKLVYSKL+LR  
Sbjct: 137  DKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEVLSAPPKLVYSKLVLRFA 196

Query: 737  KKMLVAVMQGWDKHVVVIDKVAPQNWKDEPAGRILEFCILHLAMTEIAILGTRHQIVINE 558
            KK+L AV+  WD HVV+I+K++P +WK  PAGRILEF ILHLAM+E+A+L TRH IVINE
Sbjct: 197  KKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAMSEVAVLETRHPIVINE 256

Query: 557  AVDLAKRFCDGTAPRIINGCLRTFVRIHRESTVVP 453
            AVDLAKRFCDG+APRIINGCLRTFV+  R +T  P
Sbjct: 257  AVDLAKRFCDGSAPRIINGCLRTFVK-DRATTSTP 290