BLASTX nr result

ID: Coptis23_contig00023451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023451
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251...   170   4e-40
ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-35
ref|XP_002531024.1| conserved hypothetical protein [Ricinus comm...   141   2e-31
ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30
ref|NP_001137040.1| hypothetical protein [Zea mays] gi|194698104...   130   3e-28

>ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251518 [Vitis vinifera]
           gi|297745164|emb|CBI39156.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  170 bits (431), Expect = 4e-40
 Identities = 106/228 (46%), Positives = 138/228 (60%), Gaps = 13/228 (5%)
 Frame = -2

Query: 901 MMDFLQQKQDLFNRQEEHAKEVKS--SQQYGSVDVHPELSLGPS-RHGLLLAEMTNSLSS 731
           M +F+QQ+ D       H KE  S  SQQ+  +   PELSL PS RHG+   + TNS SS
Sbjct: 2   MKEFMQQEID-------HMKEENSEKSQQFWRIMEFPELSLAPSPRHGV--DKSTNSSSS 52

Query: 730 DSDTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRNTM 557
           +S+     K++   DH+   S+  IQTS++LQ++D LPLDWEQCLDL+SGR+YYLNR T+
Sbjct: 53  ESEANYPSKKRKFSDHLFNRSDPMIQTSVDLQLKDPLPLDWEQCLDLESGRMYYLNRKTL 112

Query: 556 KKSWKWP--NQDQKLDLELNISTVSS-----STNDKKNXXXXXXXXXXXXXXXXXXXXXX 398
           +KSW  P  +  QKLDLELNIST+S+     S+ D +                       
Sbjct: 113 RKSWNCPKDHNQQKLDLELNISTLSNCPEKCSSFDSQRLQDHSKKHQHCSSSSNMVALAC 172

Query: 397 XKCHLLVMLCRSSPSCPNCKYEHSLLAQESLVSQ-NPVKPFNTLSLLN 257
             CHLLV+L +SSPSCPNCKY HSL  Q+   S+  P+K  +TLSLLN
Sbjct: 173 LNCHLLVILSKSSPSCPNCKYVHSLPTQQIPTSKAPPIKSLDTLSLLN 220


>ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|222843361|gb|EEE80908.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  155 bits (391), Expect = 2e-35
 Identities = 92/187 (49%), Positives = 117/187 (62%), Gaps = 7/187 (3%)
 Frame = -2

Query: 796 ELSLGPSRHGLLLAEMTNSLSSDSDTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLP 623
           ELSL P++   +L + TNS SS+S+   SRKRK   D     + S IQ S++L V+D LP
Sbjct: 5   ELSLAPTQ--FVLEKSTNSSSSESENNPSRKRKFSSDQYLPKNGSPIQASVDLHVKDPLP 62

Query: 622 LDWEQCLDLKSGRLYYLNRNTMKKSWKWPNQDQKLDLELNI-STVSSSTNDK---KNXXX 455
           LDWEQCLDL+SGR+YYLNR T++KSW WP ++QKLDLELN+ STV S+  D+    N   
Sbjct: 63  LDWEQCLDLESGRMYYLNRKTLRKSWNWP-RNQKLDLELNMSSTVVSNCLDQCSSSNNSL 121

Query: 454 XXXXXXXXXXXXXXXXXXXXKCHLLVMLCRSSPSCPNCKYEHSL-LAQESLVSQNPVKPF 278
                                CHLLV+L +SSPSCPNCKY HSL + Q  L   +P +  
Sbjct: 122 EASNKIHAPSNSNMVALACLNCHLLVILSKSSPSCPNCKYVHSLPILQSPLPKVSPSRSL 181

Query: 277 NTLSLLN 257
           +TLSLLN
Sbjct: 182 STLSLLN 188


>ref|XP_002531024.1| conserved hypothetical protein [Ricinus communis]
           gi|223529399|gb|EEF31362.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score =  141 bits (356), Expect = 2e-31
 Identities = 86/187 (45%), Positives = 104/187 (55%), Gaps = 19/187 (10%)
 Frame = -2

Query: 760 LAEMTNSLSSDSDTKAS--RKRKCCWDH------INSESRIQTSIELQVEDSLPLDWEQC 605
           + E  +S SS+S+   S  +KRK   DH        +   IQ S +L V+D LPLDWEQC
Sbjct: 26  IVEKLSSTSSESECNHSSRKKRKFLSDHHLLRTATTTGPPIQASFDLHVKDPLPLDWEQC 85

Query: 604 LDLKSGRLYYLNRNTMKKSWKWPNQDQKLDLELNISTVSSST---------NDKKNXXXX 452
           LDL+SGR+YYLNR T++KSW WP +DQKLDLELNIS ++  T         N   +    
Sbjct: 86  LDLESGRMYYLNRKTLRKSWNWP-KDQKLDLELNISPLTDCTPDHHQQCNNNGSNSVLLE 144

Query: 451 XXXXXXXXXXXXXXXXXXXKCHLLVMLCRSSPSCPNCKYEHSL--LAQESLVSQNPVKPF 278
                               CHLLV+L RSSPSCPNCKY HSL    Q  L   +P K  
Sbjct: 145 DSRNNFSSPSSNMVALACLNCHLLVILSRSSPSCPNCKYVHSLPITHQVLLPKISPTKSL 204

Query: 277 NTLSLLN 257
           NTLSLLN
Sbjct: 205 NTLSLLN 211


>ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|222861890|gb|EEE99432.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  139 bits (350), Expect = 1e-30
 Identities = 82/188 (43%), Positives = 110/188 (58%), Gaps = 8/188 (4%)
 Frame = -2

Query: 796 ELSLGPSRHGLLLAEMTNSLSSDSDTKASRKRKCCWDH---INSESRIQTSIELQVEDSL 626
           ELSL P++  +L     +S SS+S+   SRKRK   D    + +   IQ S++L V+D L
Sbjct: 5   ELSLAPAQF-VLEKSRNSSSSSESENTPSRKRKFFSDQYQLLKNGPPIQASVDLHVKDPL 63

Query: 625 PLDWEQCLDLKSGRLYYLNRNTMKKSWKWPNQDQKLDLELNISTVSSSTNDK----KNXX 458
           PLDWEQCLDL+SGR+YYLNR T++KSW WP + QKLDLELN+S+   +  D+     +  
Sbjct: 64  PLDWEQCLDLESGRMYYLNRKTLRKSWNWPKK-QKLDLELNMSSTIPNCPDECSSSNSSL 122

Query: 457 XXXXXXXXXXXXXXXXXXXXXKCHLLVMLCRSSPSCPNCKYEHSLLAQESLVSQ-NPVKP 281
                                 CHLLV+  +SSPSCPNCKY HS    +S   + +P + 
Sbjct: 123 EDSNNKNHASSNSNMVALACLNCHLLVIFSKSSPSCPNCKYVHSFPTLQSPQRKVSPTRS 182

Query: 280 FNTLSLLN 257
            +TLSLLN
Sbjct: 183 LSTLSLLN 190


>ref|NP_001137040.1| hypothetical protein [Zea mays] gi|194698104|gb|ACF83136.1| unknown
           [Zea mays] gi|413916772|gb|AFW56704.1| hypothetical
           protein ZEAMMB73_574320 [Zea mays]
          Length = 224

 Score =  130 bits (328), Expect = 3e-28
 Identities = 83/202 (41%), Positives = 106/202 (52%), Gaps = 16/202 (7%)
 Frame = -2

Query: 814 SVDVHPELSLGPSRHGLLLAEMT-NSLSSDSDTKASRKRKCCWDHINSESRIQTSIELQV 638
           ++++ PELSLGP   G    ++   S SS+SD  + +KRK          +   S+ELQ+
Sbjct: 24  TMELQPELSLGPVWPGFAAGDLAAKSSSSESDGTSRKKRKHYTASWEEPQQPPASLELQL 83

Query: 637 EDSLPLDWEQCLDLKSGRLYYLNRNTMKKSWKWPNQDQKLDLELNISTVSSSTNDKKN-- 464
            D LPLDWEQCLDL+SGR+YYLNR T+KKSW  P Q Q ++L+LNIST ++  N   N  
Sbjct: 84  NDPLPLDWEQCLDLQSGRMYYLNRKTLKKSWVRP-QVQSVNLDLNISTAAAIDNCAANGA 142

Query: 463 -------XXXXXXXXXXXXXXXXXXXXXXXKCHLLVMLCRSSPSCPNCKYEHSL------ 323
                                          CHLLVMLC+SSPSCPNCK+   L      
Sbjct: 143 AAAASDDEDEPRKPAGTLFSGGSMVAVPCANCHLLVMLCKSSPSCPNCKFVQPLAPAVPP 202

Query: 322 LAQESLVSQNPVKPFNTLSLLN 257
            A         VKP  TLSLL+
Sbjct: 203 AAVAHWRIDAAVKPLETLSLLH 224


Top