BLASTX nr result

ID: Coptis23_contig00023448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023448
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776...    76   2e-12
ref|XP_002526571.1| protein with unknown function [Ricinus commu...    67   1e-09
ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09

>ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776739 [Glycine max]
          Length = 870

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/100 (42%), Positives = 66/100 (66%)
 Frame = -2

Query: 302 FVLDMQFLIEVMRFGGYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDGWATNAATE 123
           F+LD+QFL+E+  +GGY+SS+       L++ M+S F SAG++  +DV  D WA +AAT+
Sbjct: 663 FILDVQFLVEIGMYGGYFSSD----PLLLLTLMKSTFNSAGLDPFKDVDDDYWAIDAATK 718

Query: 122 SIQKLLENEKSDLLHNEEDMSTSEEDPSTHQDVFGADSVE 3
           +IQKLLE EK+  LH +E + T +E+   H++     + E
Sbjct: 719 TIQKLLEIEKTS-LHPKEPVVTIKEESHEHENQINQSAYE 757


>ref|XP_002526571.1| protein with unknown function [Ricinus communis]
           gi|223534132|gb|EEF35849.1| protein with unknown
           function [Ricinus communis]
          Length = 804

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/78 (43%), Positives = 52/78 (66%)
 Frame = -2

Query: 302 FVLDMQFLIEVMRFGGYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDGWATNAATE 123
           FVLDM FL+E +++G Y+S +    ++     M+    SAG++  RD+  DGWA  AATE
Sbjct: 690 FVLDMHFLVEAIKYGEYFSKDPLVPATL----MKEAINSAGLDPFRDIYDDGWAMKAATE 745

Query: 122 SIQKLLENEKSDLLHNEE 69
           +++KLLE EK++LL  +E
Sbjct: 746 AVEKLLEIEKTELLLEDE 763


>ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|222862080|gb|EEE99622.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/99 (37%), Positives = 61/99 (61%)
 Frame = -2

Query: 302 FVLDMQFLIEVMRFGGYYSSNLSDASSALISRMESVFLSAGVETHRDVLCDGWATNAATE 123
           FVLDM FL E++RFG Y+S+N     S   + M+SVF SAG++  RD   DGW   AA E
Sbjct: 652 FVLDMHFLAEIIRFGDYFSTN----PSVPATLMKSVFDSAGLDPTRDA-DDGWIMKAAIE 706

Query: 122 SIQKLLENEKSDLLHNEEDMSTSEEDPSTHQDVFGADSV 6
           +I++L++ E+++   ++E +    E+P  +     +++V
Sbjct: 707 AIERLVKIEETESPSDDELVGIPVEEPPENHSEHASETV 745


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