BLASTX nr result

ID: Coptis23_contig00023431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023431
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326895.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|2...   125   7e-27
emb|CAN71193.1| hypothetical protein VITISV_043162 [Vitis vinifera]   124   1e-26
ref|NP_001242423.1| uncharacterized protein LOC100806535 [Glycin...   124   2e-26
ref|XP_002510343.1| conserved hypothetical protein [Ricinus comm...   124   2e-26

>ref|XP_002326895.1| predicted protein [Populus trichocarpa] gi|222835210|gb|EEE73645.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  127 bits (320), Expect = 1e-27
 Identities = 66/97 (68%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
 Frame = -1

Query: 650 KAVGSAHKTINQXXXXXXXXXXXXST-RNATKVDLRKLETTALRRYWQHFKLVDDIPNPS 474
           K+ GS+HKT+++            ST R  TKVDL KLE  AL RYW+HF LVD IPNPS
Sbjct: 131 KSTGSSHKTMSRSLSCDSQSKGSVSTPRGTTKVDLSKLEMAALWRYWRHFNLVDAIPNPS 190

Query: 473 KEQLIDIVQRHFMSQQLDELQVIVGFVQAAKRLKTIC 363
           KEQLID+VQRHFMSQQ+DELQVIVGFVQAAKRLKT+C
Sbjct: 191 KEQLIDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVC 227


>ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|222844199|gb|EEE81746.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  125 bits (314), Expect = 7e-27
 Identities = 64/97 (65%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = -1

Query: 650 KAVGSAHKTINQXXXXXXXXXXXXST-RNATKVDLRKLETTALRRYWQHFKLVDDIPNPS 474
           K+ GS+HKT+++            ST R   KVDL KLE  AL RYW+HF LVD IPNPS
Sbjct: 127 KSTGSSHKTMSRSLSCDSQSKGSISTPRGTAKVDLSKLEVAALWRYWRHFNLVDSIPNPS 186

Query: 473 KEQLIDIVQRHFMSQQLDELQVIVGFVQAAKRLKTIC 363
           KEQLID+VQRHFMSQQ+DELQVIVGFV+AAKRLKT+C
Sbjct: 187 KEQLIDVVQRHFMSQQMDELQVIVGFVKAAKRLKTVC 223


>emb|CAN71193.1| hypothetical protein VITISV_043162 [Vitis vinifera]
          Length = 234

 Score =  124 bits (312), Expect = 1e-26
 Identities = 58/72 (80%), Positives = 65/72 (90%)
 Frame = -1

Query: 575 TRNATKVDLRKLETTALRRYWQHFKLVDDIPNPSKEQLIDIVQRHFMSQQLDELQVIVGF 396
           T+++TKVD  KLE TAL RYW+HF LVD IPNPSKEQLID+VQRHFMSQQLDELQVI+GF
Sbjct: 163 TQSSTKVDFSKLEKTALLRYWRHFNLVDSIPNPSKEQLIDVVQRHFMSQQLDELQVIIGF 222

Query: 395 VQAAKRLKTICN 360
            QAAKRLKT+CN
Sbjct: 223 AQAAKRLKTVCN 234


>ref|NP_001242423.1| uncharacterized protein LOC100806535 [Glycine max]
           gi|255641384|gb|ACU20969.1| unknown [Glycine max]
          Length = 222

 Score =  124 bits (311), Expect = 2e-26
 Identities = 60/96 (62%), Positives = 73/96 (76%)
 Frame = -1

Query: 650 KAVGSAHKTINQXXXXXXXXXXXXSTRNATKVDLRKLETTALRRYWQHFKLVDDIPNPSK 471
           + +GS+HKT+++            S  N + VDL KLE  AL RYW+HF LVD +PNPSK
Sbjct: 126 RTLGSSHKTMSRSFSGDSQSKGSVSMPNGSAVDLSKLEMAALWRYWRHFNLVDTVPNPSK 185

Query: 470 EQLIDIVQRHFMSQQLDELQVIVGFVQAAKRLKTIC 363
           EQL+D+VQRHFMSQQ+DELQVIVGFVQAAKRLKT+C
Sbjct: 186 EQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVC 221


>ref|XP_002510343.1| conserved hypothetical protein [Ricinus communis]
           gi|223551044|gb|EEF52530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score =  124 bits (310), Expect = 2e-26
 Identities = 65/99 (65%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
 Frame = -1

Query: 650 KAVGSAHKTINQXXXXXXXXXXXXST-RNATKVDLRKLETTALRRYWQHFKLVDDIP-NP 477
           K+ GS+HKT+++            ST R ATKVDL KLE  AL RYW++F LVD IP NP
Sbjct: 127 KSTGSSHKTMSRSLSCDSQSKSSVSTPRGATKVDLSKLEMAALWRYWKYFNLVDAIPTNP 186

Query: 476 SKEQLIDIVQRHFMSQQLDELQVIVGFVQAAKRLKTICN 360
           SKEQL+D++QRHFMSQQ+DELQVIVGFVQAAKRLKT+CN
Sbjct: 187 SKEQLVDVIQRHFMSQQMDELQVIVGFVQAAKRLKTVCN 225


Top