BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023430
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ri...   296   6e-78
ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplasti...   286   3e-75
ref|XP_003546416.1| PREDICTED: nifU-like protein 3, chloroplasti...   279   5e-73
ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplasti...   279   7e-73
gb|ABK95780.1| unknown [Populus trichocarpa]                          278   1e-72

>ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223528244|gb|EEF30298.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 220

 Score =  296 bits (757), Expect = 6e-78
 Identities = 154/207 (74%), Positives = 171/207 (82%)
 Frame = -3

Query: 786 LSLLKNFTPEFSLISSKQNSFVRGKFSIRHFFPSNTSHRSRKQAGVVIAPRCVLPLTEES 607
           LSL K    +F + SS++N+F+RG+F IRHF     +   RK AG+V++P CVLPLTEE+
Sbjct: 14  LSLFKKPVSDFCIFSSRKNAFLRGQFHIRHFSSIKLNRAPRKFAGLVVSPSCVLPLTEEN 73

Query: 606 VEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIP 427
           VEKVLDEVRPGLMADGGNV LHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIP
Sbjct: 74  VEKVLDEVRPGLMADGGNVVLHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIP 133

Query: 426 EIMEVEQILDTETGXXXXXXXXXXXXXEIRPYLSGTGGGVLELVQIDGYVAKVRLSGPAA 247
           EIM VEQILDTETG             EIRPYL+GTGGGVLELVQID Y+ KVRLSGPAA
Sbjct: 134 EIMAVEQILDTETGLELNDENVEKVLAEIRPYLAGTGGGVLELVQIDDYIVKVRLSGPAA 193

Query: 246 TVMTVRVAITQKLREKIPAIAAVQLIE 166
            VMTVRVA+TQKLR+KIPAIAAVQLI+
Sbjct: 194 GVMTVRVALTQKLRDKIPAIAAVQLID 220


>ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
           gi|297735420|emb|CBI17860.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score =  286 bits (733), Expect = 3e-75
 Identities = 154/228 (67%), Positives = 173/228 (75%)
 Frame = -3

Query: 849 SSRTARLNPFIPPPKATSTVHLSLLKNFTPEFSLISSKQNSFVRGKFSIRHFFPSNTSHR 670
           S+    +N   P      + HLS+ K    + S  SS+ NSF+RG+F  RH     +   
Sbjct: 9   STAANNVNSSFPSSLWIPSSHLSISKKPISDCSAFSSRDNSFMRGQFQSRHLLGCCSRRV 68

Query: 669 SRKQAGVVIAPRCVLPLTEESVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGS 490
             ++AG+++ P CVLPLTEE+VEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGS
Sbjct: 69  QSRRAGILVLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGS 128

Query: 489 CPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXEIRPYLSGTGGG 310
           CPSSTMTLKMGIETRLRDKIPEI  VEQILDTETG             EIRPYL+GTGGG
Sbjct: 129 CPSSTMTLKMGIETRLRDKIPEIEAVEQILDTETGLELNEENVEKVLAEIRPYLAGTGGG 188

Query: 309 VLELVQIDGYVAKVRLSGPAATVMTVRVAITQKLREKIPAIAAVQLIE 166
           VLELVQI+ YV KVRLSGPAA VMTVRVA+TQKLREKIPAIAAVQLI+
Sbjct: 189 VLELVQINDYVIKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLID 236


>ref|XP_003546416.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Glycine max]
          Length = 236

 Score =  279 bits (714), Expect = 5e-73
 Identities = 156/232 (67%), Positives = 173/232 (74%), Gaps = 8/232 (3%)
 Frame = -3

Query: 837 ARLNPFIPPPKATSTV-------HLSLLKNFTPEFSLISSKQNSFVRGK-FSIRHFFPSN 682
           A L P     KAT T+        L  LKN        SSK+N F+RG+  +I+ FF   
Sbjct: 5   ALLTPTTQSLKATRTIAMLYPTHRLLSLKNPVSNTRGFSSKENIFIRGQQINIKQFFGLI 64

Query: 681 TSHRSRKQAGVVIAPRCVLPLTEESVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQG 502
           + H  R +AG V++PRC LPLTEE+VEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQG
Sbjct: 65  SGHSPRNKAGGVVSPRCGLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQG 124

Query: 501 ACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXEIRPYLSG 322
           ACGSCPSS MTLKMGIETRLRDKIPEI+EVEQI+DTETG             EIRPYL G
Sbjct: 125 ACGSCPSSAMTLKMGIETRLRDKIPEILEVEQIMDTETGLELTEENVENVLSEIRPYLVG 184

Query: 321 TGGGVLELVQIDGYVAKVRLSGPAATVMTVRVAITQKLREKIPAIAAVQLIE 166
           TGGG+LELVQI  YV KVRLSGPAA V TVRVA+TQKLR+KIPAIAAVQLI+
Sbjct: 185 TGGGILELVQIKDYVVKVRLSGPAAGVTTVRVALTQKLRDKIPAIAAVQLID 236


>ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
           sativus] gi|449510563|ref|XP_004163700.1| PREDICTED:
           nifU-like protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  279 bits (713), Expect = 7e-73
 Identities = 151/225 (67%), Positives = 175/225 (77%)
 Frame = -3

Query: 840 TARLNPFIPPPKATSTVHLSLLKNFTPEFSLISSKQNSFVRGKFSIRHFFPSNTSHRSRK 661
           + R  PF   P A +T++ S     +P +  +S  ++SF RG+F  RHF   N+S    +
Sbjct: 6   STRAQPFKSTPIA-ATLYRSPSHPASPSY--LSFFKSSFFRGQFCSRHFLRFNSSCTRIR 62

Query: 660 QAGVVIAPRCVLPLTEESVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPS 481
             G V++P CVLPLTEE+VEKVLDEVRPGLMADGGNVALHEIDGLVV+LKLQGACGSCPS
Sbjct: 63  HLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPS 122

Query: 480 STMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXEIRPYLSGTGGGVLE 301
           STMTLKMGIETRLRDKIPEI+EVEQI+DTETG             EIRPYL+GTGGG+LE
Sbjct: 123 STMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGILE 182

Query: 300 LVQIDGYVAKVRLSGPAATVMTVRVAITQKLREKIPAIAAVQLIE 166
           +++I  YV KVRLSGPAA VMTVRVA+TQKLREKIPAIAAVQLIE
Sbjct: 183 VIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227


>gb|ABK95780.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  278 bits (711), Expect = 1e-72
 Identities = 152/224 (67%), Positives = 172/224 (76%), Gaps = 2/224 (0%)
 Frame = -3

Query: 831 LNPFIPPPKATSTVHLSLLKNFTPEFSLISSKQNSFVRGKFSI--RHFFPSNTSHRSRKQ 658
           LNPF+   + T    L    +   +   +SSKQN+F+RG+F    RHF     +    K 
Sbjct: 2   LNPFLSLAQKTQQ-SLLFKTDAVSDSCGLSSKQNAFLRGQFQFHSRHFLHFKLNRGRMKC 60

Query: 657 AGVVIAPRCVLPLTEESVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSS 478
            GVV++P CVLPLTEE+VEKVLDEVRPGLM DGGNVALHEIDGLVVVLKLQGACGSCPSS
Sbjct: 61  TGVVVSPSCVLPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSS 120

Query: 477 TMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXEIRPYLSGTGGGVLEL 298
           +MTLKMGIET+LRDKIPEIM+VEQI+DTETG             EIRPYL+GTGGGVLEL
Sbjct: 121 SMTLKMGIETKLRDKIPEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVLEL 180

Query: 297 VQIDGYVAKVRLSGPAATVMTVRVAITQKLREKIPAIAAVQLIE 166
           VQI+ YV KVRLSGPAA VMTVRVA+TQKLRE IPAIAAVQLI+
Sbjct: 181 VQINDYVVKVRLSGPAAGVMTVRVALTQKLRETIPAIAAVQLID 224