BLASTX nr result

ID: Coptis23_contig00023424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023424
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321554.1| predicted protein [Populus trichocarpa] gi|2...    66   5e-09

>ref|XP_002321554.1| predicted protein [Populus trichocarpa] gi|222868550|gb|EEF05681.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
 Frame = -1

Query: 609 KRNNKKSLCEKTMKIVVNIMKISSLSLAQMSLGNTAAPQTITYENSSSDAFVEITR---I 439
           K  N  SLCEK+MK+VVNI+K+SS S+A+MSLG T +P   T   +     V + +   +
Sbjct: 4   KHGNDNSLCEKSMKMVVNIIKLSSFSIAKMSLG-TPSPPVATKSLAHVTGSVVVAKEPLL 62

Query: 438 TQDSGQLRXXXXXXXXXXXXXXXXXXXEKASSYVIREVKDV-NEAASDYIHKFHDNNRKH 262
           +Q  G  R                      SS+VI E   V N  ASDYI K H+ NR  
Sbjct: 63  SQIPGSRRSQEPQGSSKPKSFVMQPDEGNGSSHVIHEDNSVINGRASDYIRKVHEKNRND 122

Query: 261 A 259
           A
Sbjct: 123 A 123


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