BLASTX nr result

ID: Coptis23_contig00023422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023422
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274867.1| PREDICTED: uncharacterized protein LOC100262...   141   2e-31
ref|NP_001237432.1| uncharacterized protein LOC100306606 [Glycin...   140   3e-31
ref|XP_002515684.1| conserved hypothetical protein [Ricinus comm...   139   6e-31
ref|XP_004146236.1| PREDICTED: uncharacterized protein LOC101219...   138   2e-30
ref|NP_001235993.1| uncharacterized protein LOC100500296 [Glycin...   137   2e-30

>ref|XP_002274867.1| PREDICTED: uncharacterized protein LOC100262355 [Vitis vinifera]
           gi|302143947|emb|CBI23052.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  141 bits (356), Expect = 2e-31
 Identities = 85/163 (52%), Positives = 101/163 (61%), Gaps = 19/163 (11%)
 Frame = +1

Query: 109 MERLPTDVSHYIFRFLDHKNLATAQRVCRSWKVLASGNILWCKLFKERWGEAHASLYAPL 288
           MERLP D+   IF  LDH+NLAT+ +VCR WKVLAS NILW  LFKERWGE  A+ YAP 
Sbjct: 1   MERLPGDLCLKIFYLLDHQNLATSLQVCRKWKVLASDNILWSNLFKERWGEDRAAFYAPT 60

Query: 289 DSRSWKDIYGIQHSCDRIVWGLKIIRKG-GDY----EGIIRRYLVS----RNATNVS--- 432
             +SWKD+Y  Q  CDR+  GLKIIR+G GDY    +G I+ +L S    + ATN S   
Sbjct: 61  GLKSWKDVYEAQDRCDRVGLGLKIIREGVGDYYLVHQGEIQHHLGSKRQRKGATNCSFSS 120

Query: 433 ----NGRAQSNLKRPYSGILDDI---IGDSEVPSSSTKRNPVL 540
                G   SN + P  GILD I   IGD EV S+  KR  +L
Sbjct: 121 ETGFIGEGCSNGEEPCLGILDKILFFIGDLEVASTDAKRGRIL 163


>ref|NP_001237432.1| uncharacterized protein LOC100306606 [Glycine max]
           gi|255629049|gb|ACU14869.1| unknown [Glycine max]
          Length = 165

 Score =  140 bits (354), Expect = 3e-31
 Identities = 80/165 (48%), Positives = 103/165 (62%), Gaps = 21/165 (12%)
 Frame = +1

Query: 109 MERLPTDVSHYIFRFLDHKNLATAQRVCRSWKVLASGNILWCKLFKERWGEAHASLYAPL 288
           MERLP ++   IF  LD+++LA AQ+VCR WK++AS N LW  LFKERWGE HA+ YAP+
Sbjct: 1   MERLPLEICMKIFYLLDYQHLAVAQQVCRKWKLVASENALWSDLFKERWGEDHAAFYAPV 60

Query: 289 DSRSWKDIYGIQHSCDRIVWGLKIIRKGGDY----EGIIRRYLVSR-------------- 414
            S+SWKD+Y +Q  CDRI  GLKIIR+G DY    +G I+R+L SR              
Sbjct: 61  GSKSWKDVYEVQDLCDRIGVGLKIIREGIDYYLIHQGEIQRHLGSRKNHEKEIGHCSNTL 120

Query: 415 NATNVSNGRAQSNLKRPYSGILDDI---IGDSEVPSSSTKRNPVL 540
           N+ +  NG      +R   GILD I   IGD EV S+  KR+ V+
Sbjct: 121 NSESNFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165


>ref|XP_002515684.1| conserved hypothetical protein [Ricinus communis]
           gi|223545227|gb|EEF46736.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  139 bits (351), Expect = 6e-31
 Identities = 76/160 (47%), Positives = 100/160 (62%), Gaps = 19/160 (11%)
 Frame = +1

Query: 109 MERLPTDVSHYIFRFLDHKNLATAQRVCRSWKVLASGNILWCKLFKERWGEAHASLYAPL 288
           MERLP D+   IF +LDH+NLATAQ+VC+ WK LAS + LW  LFKERW   +A+ +AP+
Sbjct: 1   MERLPVDLCLKIFSWLDHQNLATAQQVCKKWKALASQDALWSNLFKERWRGNNAAFFAPV 60

Query: 289 DSRSWKDIYGIQHSCDRIVWGLKIIRKGGDY----EGIIRRYLVSRNATN---------- 426
           DS+SWKD+Y +Q  CDR+  GLKIIR+GGDY    +G I+RYL SR              
Sbjct: 61  DSKSWKDVYEVQDRCDRVGLGLKIIREGGDYYLVHQGEIQRYLGSRRQNKRAFSSSLSSK 120

Query: 427 --VSNGRAQSNLKRPYSGILDDI---IGDSEVPSSSTKRN 531
             +   ++    +    G+LD I   IGD EV S+ TKR+
Sbjct: 121 GMLIGDKSMKEEEPSNQGMLDKILFFIGDLEVASTDTKRS 160


>ref|XP_004146236.1| PREDICTED: uncharacterized protein LOC101219018 [Cucumis sativus]
           gi|449515969|ref|XP_004165020.1| PREDICTED:
           uncharacterized protein LOC101229696 [Cucumis sativus]
          Length = 163

 Score =  138 bits (347), Expect = 2e-30
 Identities = 78/160 (48%), Positives = 96/160 (60%), Gaps = 19/160 (11%)
 Frame = +1

Query: 109 MERLPTDVSHYIFRFLDHKNLATAQRVCRSWKVLASGNILWCKLFKERWGEAHASLYAPL 288
           ME+LPT++   IF FLD +NLATA +VCR W  LAS NILW  LFKERWGE HA+ Y P+
Sbjct: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60

Query: 289 DSRSWKDIYGIQHSCDRIVWGLKIIRKGGDY----EGIIRRYLVSRNATNVSNGRAQSNL 456
            S+SWKD Y +Q  CDR   GL+IIR+G DY    +G I+R+L SR   N        + 
Sbjct: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120

Query: 457 KRPY------------SGILDDI---IGDSEVPSSSTKRN 531
           KR +             GILD I   IGD EV S+  KR+
Sbjct: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRS 160


>ref|NP_001235993.1| uncharacterized protein LOC100500296 [Glycine max]
           gi|255629960|gb|ACU15332.1| unknown [Glycine max]
          Length = 165

 Score =  137 bits (346), Expect = 2e-30
 Identities = 78/165 (47%), Positives = 101/165 (61%), Gaps = 21/165 (12%)
 Frame = +1

Query: 109 MERLPTDVSHYIFRFLDHKNLATAQRVCRSWKVLASGNILWCKLFKERWGEAHASLYAPL 288
           ME LP ++   IF  LD+++LA AQ+VCR WK++AS N LW  LFKERWGE HA+ YAP+
Sbjct: 1   MEMLPLEICMKIFCLLDYQHLAVAQQVCRKWKLVASDNTLWSNLFKERWGEDHAAFYAPM 60

Query: 289 DSRSWKDIYGIQHSCDRIVWGLKIIRKGGDY----EGIIRRYLVSR-------------- 414
            S+SWKD+Y +Q  CDRI  G+KIIR+G DY    +G I+R+L SR              
Sbjct: 61  GSKSWKDVYEVQDRCDRIGLGMKIIREGIDYYLVHQGEIQRHLGSRKNHEKETGHNSHTL 120

Query: 415 NATNVSNGRAQSNLKRPYSGILDDI---IGDSEVPSSSTKRNPVL 540
           N+    NG      +R   GILD I   IGD EV S+  KR+ V+
Sbjct: 121 NSEIDFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165


Top