BLASTX nr result
ID: Coptis23_contig00023418
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00023418 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACX85638.1| putative transposase [Cucumis melo] 127 1e-27 ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3... 104 7e-21 emb|CAB82966.1| putative protein [Arabidopsis thaliana] 99 4e-19 ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group] g... 92 4e-17 gb|ABA94758.1| hAT family dimerisation domain containing protein... 91 8e-17 >gb|ACX85638.1| putative transposase [Cucumis melo] Length = 680 Score = 127 bits (318), Expect = 1e-27 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 2/122 (1%) Frame = -3 Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182 F+Q+ C + + RM+I+D LPF FVES+GF FC P+FVIP T+A++C +M+ Sbjct: 102 FTQENCRKMLARMVILDELPFKFVESEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEK 161 Query: 181 XXXXXEFR--GQRICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8 GQR+C+ TD WTS+Q+I Y+ +TAH++D +WNL K+IL+ C V NHK T Sbjct: 162 KKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANHKGDT 221 Query: 7 VG 2 +G Sbjct: 222 IG 223 >ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1| Oligoribonuclease [Medicago truncatula] Length = 1551 Score = 104 bits (260), Expect = 7e-21 Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 2/122 (1%) Frame = -3 Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182 F +A+ RMIIVD LPF+FVE++GF F +VT P +P +AR+C+ ++ Sbjct: 1038 FDVDVSRQALARMIIVDELPFSFVENEGFRYFMSVTQPRLPLPGRLAIARDCLNLYTSEK 1097 Query: 181 XXXXXEFR--GQRICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8 F Q +C+ TD WTS+Q+I Y+ +TAH++D +W + K+IL+ C + +HK Sbjct: 1098 HKLRNMFTKANQSVCLTTDTWTSVQNINYMVLTAHFIDQDWKMHKRILNFCPITSHKGEV 1157 Query: 7 VG 2 +G Sbjct: 1158 IG 1159 >emb|CAB82966.1| putative protein [Arabidopsis thaliana] Length = 705 Score = 99.0 bits (245), Expect = 4e-19 Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 2/121 (1%) Frame = -3 Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182 F Q C +A ++MII+D L F+FVE+ GF FC + P F IP +T+ R+ + ++ Sbjct: 105 FDQNVCRQATVKMIIMDELSFSFVENDGFKHFCEMAVPWFTIPSRRTITRDVVGLYRAEK 164 Query: 181 XXXXXEFRGQRICVG--TDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8 R + TDIWTS+ + Y+ VTAH++D +W L ++I+S +P+HK T Sbjct: 165 TALKTILSRNRQAMSFTTDIWTSITTLSYMVVTAHFIDMDWQLHRRIISFSPIPDHKGKT 224 Query: 7 V 5 + Sbjct: 225 I 225 >ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group] gi|16924038|gb|AAL31650.1|AC079179_5 Putative Tam3-like transposon protein [Oryza sativa] gi|31429904|gb|AAP51893.1| hAT family dimerisation domain containing protein [Oryza sativa Japonica Group] gi|255679178|dbj|BAH94738.1| Os10g0118700 [Oryza sativa Japonica Group] Length = 737 Score = 92.0 bits (227), Expect = 4e-17 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Frame = -3 Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182 F MII D PF E G F + CP FV+P +T+ R C++++ Sbjct: 142 FDPDKLRRCFAEMIIEDEQPFVLSERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEK 201 Query: 181 XXXXXEFRGQ--RICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8 F+ R+C+ TD WT+ ++CVTAH++D+EWNL+KKI+ +V H+ Sbjct: 202 EKLKKFFKDNCVRVCLTTDTWTAKNSQNFMCVTAHFIDNEWNLQKKIIGFFLVKGHRGED 261 Query: 7 VG 2 +G Sbjct: 262 IG 263 >gb|ABA94758.1| hAT family dimerisation domain containing protein [Oryza sativa Japonica Group] Length = 932 Score = 91.3 bits (225), Expect = 8e-17 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Frame = -3 Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182 F MII D PF E G F + CP FV+P +T+ R C++++ Sbjct: 384 FDPDKLRRCFAEMIIEDEQPFVLSERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEK 443 Query: 181 XXXXXEFRGQ--RICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8 F+ R+C+ TD WT+ ++CVTAH++D+EWNL+KKI+ V H+ Sbjct: 444 EKLKKFFKDNCVRVCLTTDTWTAKNSQNFMCVTAHFIDNEWNLQKKIIGFFFVKGHRGED 503 Query: 7 VG 2 +G Sbjct: 504 IG 505