BLASTX nr result

ID: Coptis23_contig00023418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023418
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX85638.1| putative transposase [Cucumis melo]                    127   1e-27
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   104   7e-21
emb|CAB82966.1| putative protein [Arabidopsis thaliana]                99   4e-19
ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group] g...    92   4e-17
gb|ABA94758.1| hAT family dimerisation domain containing protein...    91   8e-17

>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  127 bits (318), Expect = 1e-27
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182
           F+Q+ C + + RM+I+D LPF FVES+GF  FC    P+FVIP   T+A++C +M+    
Sbjct: 102 FTQENCRKMLARMVILDELPFKFVESEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEK 161

Query: 181 XXXXXEFR--GQRICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8
                     GQR+C+ TD WTS+Q+I Y+ +TAH++D +WNL K+IL+ C V NHK  T
Sbjct: 162 KKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANHKGDT 221

Query: 7   VG 2
           +G
Sbjct: 222 IG 223


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361  FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182
            F      +A+ RMIIVD LPF+FVE++GF  F +VT P   +P    +AR+C+ ++    
Sbjct: 1038 FDVDVSRQALARMIIVDELPFSFVENEGFRYFMSVTQPRLPLPGRLAIARDCLNLYTSEK 1097

Query: 181  XXXXXEFR--GQRICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8
                  F    Q +C+ TD WTS+Q+I Y+ +TAH++D +W + K+IL+ C + +HK   
Sbjct: 1098 HKLRNMFTKANQSVCLTTDTWTSVQNINYMVLTAHFIDQDWKMHKRILNFCPITSHKGEV 1157

Query: 7    VG 2
            +G
Sbjct: 1158 IG 1159


>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = -3

Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182
           F Q  C +A ++MII+D L F+FVE+ GF  FC +  P F IP  +T+ R+ + ++    
Sbjct: 105 FDQNVCRQATVKMIIMDELSFSFVENDGFKHFCEMAVPWFTIPSRRTITRDVVGLYRAEK 164

Query: 181 XXXXXEFRGQRICVG--TDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8
                     R  +   TDIWTS+  + Y+ VTAH++D +W L ++I+S   +P+HK  T
Sbjct: 165 TALKTILSRNRQAMSFTTDIWTSITTLSYMVVTAHFIDMDWQLHRRIISFSPIPDHKGKT 224

Query: 7   V 5
           +
Sbjct: 225 I 225


>ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group]
           gi|16924038|gb|AAL31650.1|AC079179_5 Putative Tam3-like
           transposon protein [Oryza sativa]
           gi|31429904|gb|AAP51893.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255679178|dbj|BAH94738.1| Os10g0118700 [Oryza sativa
           Japonica Group]
          Length = 737

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182
           F           MII D  PF   E  G   F  + CP FV+P  +T+ R C++++    
Sbjct: 142 FDPDKLRRCFAEMIIEDEQPFVLSERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEK 201

Query: 181 XXXXXEFRGQ--RICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8
                 F+    R+C+ TD WT+     ++CVTAH++D+EWNL+KKI+   +V  H+   
Sbjct: 202 EKLKKFFKDNCVRVCLTTDTWTAKNSQNFMCVTAHFIDNEWNLQKKIIGFFLVKGHRGED 261

Query: 7   VG 2
           +G
Sbjct: 262 IG 263


>gb|ABA94758.1| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 932

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361 FSQQACEEAVLRMIIVDGLPFNFVESQGFIDFCNVTCPEFVIPCCKTLARNCIRMFXXXX 182
           F           MII D  PF   E  G   F  + CP FV+P  +T+ R C++++    
Sbjct: 384 FDPDKLRRCFAEMIIEDEQPFVLSERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEK 443

Query: 181 XXXXXEFRGQ--RICVGTDIWTSLQDIKYLCVTAHYVDSEWNLKKKILSLCVVPNHKSAT 8
                 F+    R+C+ TD WT+     ++CVTAH++D+EWNL+KKI+    V  H+   
Sbjct: 444 EKLKKFFKDNCVRVCLTTDTWTAKNSQNFMCVTAHFIDNEWNLQKKIIGFFFVKGHRGED 503

Query: 7   VG 2
           +G
Sbjct: 504 IG 505


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