BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023407
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig...    59   9e-07
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]    59   9e-07

>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1339

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = -3

Query: 313 SSSSECMDLVEHGN-GWPKIQNGEKVHPLDFQDNVTEEFGDKANACKAIHQLICTPHQDD 137
           SSS++    + HGN      +N +KVHPLD Q+++ +  GDKA A +   ++     QD 
Sbjct: 256 SSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKASRDNTEI-----QDY 310

Query: 136 AKALREKYEEGPNSNITEVFGMRSIQDMLRESQSDTPVSSYSCD 5
            KAL    ++    +I     ++ +QD+L ESQSDTP S  S D
Sbjct: 311 RKALNNS-DQVSRQDIKRSSNIKCLQDILMESQSDTPTSDDSFD 353


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = -3

Query: 313 SSSSECMDLVEHGN-GWPKIQNGEKVHPLDFQDNVTEEFGDKANACKAIHQLICTPHQDD 137
           SSS++    + HGN      +N +KVHPLD Q+++ +  GDKA A +   ++     QD 
Sbjct: 256 SSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKASRDNTEI-----QDY 310

Query: 136 AKALREKYEEGPNSNITEVFGMRSIQDMLRESQSDTPVSSYSCD 5
            KAL    ++    +I     ++ +QD+L ESQSDTP S  S D
Sbjct: 311 RKALNNS-DQVSRQDIKRSSNIKCLQDILMESQSDTPTSDDSFD 353