BLASTX nr result

ID: Coptis23_contig00023405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023405
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   201   1e-49
ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48
ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
emb|CBI39827.3| unnamed protein product [Vitis vinifera]              184   2e-44
ref|XP_004165720.1| PREDICTED: LOW QUALITY PROTEIN: UPF0481 prot...   183   4e-44

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  201 bits (512), Expect = 1e-49
 Identities = 123/280 (43%), Positives = 162/280 (57%), Gaps = 3/280 (1%)
 Frame = -1

Query: 832 SNEFVKMMLLDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFIL 653
           S+EFV MMLLDGCFIIELFL+ +    R +DDPIFN + +L+ L+RDL+LLENQ+PFF+L
Sbjct: 125 SDEFVTMMLLDGCFIIELFLKNKNKQLRDEDDPIFNRTMVLTDLHRDLILLENQLPFFVL 184

Query: 652 EYLITSNRVDLHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNNHLLDLVRNALLPPHV 473
           E L           PS  + E    FF  +    + +R       HLLDL+R   +PP  
Sbjct: 185 ETLFNLIENTDQEGPSTSVLELTYVFFKFLGLQEVLIRDSQPDVKHLLDLLRLWFVPPSS 244

Query: 472 ERNMSQNIRNLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEPLL 293
            ++ S++    +LI    +L + G+                NGVLEIPPL I+D T+ LL
Sbjct: 245 TKSTSKS--KFELIRSVTELHEAGVKFRMGTVSCLMEIKFINGVLEIPPLTIEDTTDSLL 302

Query: 292 RNLIAFEQCHIGCTNEF-TSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVMGILNK 116
            NLIAFEQC    T  + T Y  LM+ LI++  DV +L  +GII++ LG +E V  +  K
Sbjct: 303 GNLIAFEQCCNRFTPHYITDYVILMEYLINSPKDVALLSRYGIINNLLGDNEGVSHLFKK 362

Query: 115 LCIEV--NLDYEFYFSELCEQVNNYCKMKWHRWRADLRRD 2
           L  EV  N D +F FS LC  VN Y K +WH WRA LRRD
Sbjct: 363 LGKEVVFNSD-KFQFSNLCRDVNKYHKTRWHIWRATLRRD 401


>ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|222870405|gb|EEF07536.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  197 bits (502), Expect = 2e-48
 Identities = 118/279 (42%), Positives = 156/279 (55%), Gaps = 2/279 (0%)
 Frame = -1

Query: 832 SNEFVKMMLLDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFIL 653
           + +F KM+L DGCFI+ELFLR+  +D ++  DPIF TSWM+S+L RDL LLENQIPFF+L
Sbjct: 122 NTDFAKMLLFDGCFILELFLRFSSDDAKRQYDPIFTTSWMISTLQRDLALLENQIPFFVL 181

Query: 652 EYLITSNRVDLHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNN--HLLDLVRNALLPP 479
             L   + V         L E ALRFF   +     +       N  HLL L+  + LP 
Sbjct: 182 TELY-KHIVRHTATDQPRLVELALRFFRPELNTNEGIGAVISGGNFCHLLGLLHTSYLPS 240

Query: 478 HVERNMSQNIRNLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEP 299
            +  +        KL+ CA +L   GI                NGV +IPPL+I D T+ 
Sbjct: 241 SLRVDQRGGAGPWKLLSCATELCAAGIKFQKDTTKHQLDLCFENGVFKIPPLQIHDSTDS 300

Query: 298 LLRNLIAFEQCHIGCTNEFTSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVMGILN 119
           L RNLIAFEQ   GC    TSYA LMD L+   +DVE+L    II + LG  EDV  + N
Sbjct: 301 LFRNLIAFEQSVQGCRQYMTSYALLMDRLVDTSSDVELLAKKRIIQNDLGGYEDVTDLFN 360

Query: 118 KLCIEVNLDYEFYFSELCEQVNNYCKMKWHRWRADLRRD 2
            +C +V +  EF F++LCEQV+ Y    WH ++A L++D
Sbjct: 361 NICKQV-VVREFNFTQLCEQVDAYYNKSWHGYKASLKQD 398


>ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|222858302|gb|EEE95849.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  187 bits (475), Expect = 3e-45
 Identities = 113/283 (39%), Positives = 153/283 (54%), Gaps = 8/283 (2%)
 Frame = -1

Query: 826 EFVKMMLLDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEY 647
           +  KM+L+DGCFI+ELFLR+   D R  DDP+FNTSWM+ +L RDL LLENQIPFF LE+
Sbjct: 121 DLAKMLLVDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEW 180

Query: 646 LI--------TSNRVDLHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNNHLLDLVRNA 491
           L             +   P+ +    +S+L    G + +  ++ P      HLL L+ N 
Sbjct: 181 LFKLTVKPSAIGQSLPTLPDLAFDFFKSSLYINRGTLAVSRRIVP------HLLGLIHNC 234

Query: 490 LLPPHVERNMSQNIRNLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQD 311
            LP     N  +     + I C+  L + GI                NGV +IPPL+I D
Sbjct: 235 YLPSSSRPN-PRGRGGWEFIHCSSVLLEAGIEFERDTTSSLFDLKFENGVFKIPPLRIHD 293

Query: 310 VTEPLLRNLIAFEQCHIGCTNEFTSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVM 131
            T  L +NLIA+EQ   G     TSY  LMD LI   NDVE+L    II++  G  EDV 
Sbjct: 294 STVSLFQNLIAYEQRFHGGQQYITSYFLLMDRLIDTPNDVELLVQKRIIENDFGGWEDVS 353

Query: 130 GILNKLCIEVNLDYEFYFSELCEQVNNYCKMKWHRWRADLRRD 2
              N +C ++ L  +FY++ LCE VN Y   +W+R++AD RRD
Sbjct: 354 AFFNSICKQIVLQ-DFYYAGLCEDVNAYYNKQWYRYKADFRRD 395


>emb|CBI39827.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  184 bits (467), Expect = 2e-44
 Identities = 113/298 (37%), Positives = 164/298 (55%), Gaps = 21/298 (7%)
 Frame = -1

Query: 832  SNEFVKMMLLDGCFIIELF-LRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFI 656
            S+E ++MM++DGCF++EL  L ++F++  + +DPIF T WML +L RDL+ LENQ+PFF+
Sbjct: 153  SDELIQMMVIDGCFVLELLRLYFKFDNEEEVEDPIFTTRWMLRTLQRDLLKLENQLPFFV 212

Query: 655  LEYLITSNRVDLHPNPSKYLTESALRFFSGMMP---IRLQMRPRSLSNNHLLDLVRNALL 485
            LE L    R+   P     L +  + FF  ++P   I+ ++ P     +H+LD+ R+  L
Sbjct: 213  LEKLYELIRLVDDPP----LVDLVVTFFDPLLPRKNIKGKLNPNE-EFDHMLDVFRSTFL 267

Query: 484  PPHVERNMSQNIRNLK------------LIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGV 341
                ER      + L+            LI C  +LQ+ G+                +G+
Sbjct: 268  SSINERTKPAGWKQLQKLDNIPLVEERQLIHCVTELQEAGVRFKMREDLDLLDISFKDGM 327

Query: 340  LEIPPLKIQDVTEPLLRNLIAFEQCHIGCTNEFTSYAFLMDSLISNKNDVEILQNHGIID 161
            L+IPPL I D T PL  NL+A+EQC       FT++    DSLI++  DV IL  +GII+
Sbjct: 328  LKIPPLYIDDNTVPLFLNLVAYEQCDQDAKPFFTNFCMFFDSLINSHTDVGILHKNGIIN 387

Query: 160  HWLGSDEDVMGILNKLCIEVNLDY-EFYFSELCEQVNNYCKM----KWHRWRADLRRD 2
            H LGSD+DV  + NKL  E+  D  E Y S+    VN+YCK     KWH W  +L RD
Sbjct: 388  HVLGSDKDVANLFNKLGREIVYDLDECYLSQQMMDVNDYCKQYFASKWHVWFTNLIRD 445


>ref|XP_004165720.1| PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like
            [Cucumis sativus]
          Length = 488

 Score =  183 bits (465), Expect = 4e-44
 Identities = 122/313 (38%), Positives = 162/313 (51%), Gaps = 36/313 (11%)
 Frame = -1

Query: 832  SNEFVKMMLLDGCFIIELFLRYRFNDRRQD---DDPIFNTSWMLSSLNRDLMLLENQIPF 662
            SNEFV+MM+LDGCF++ELF       ++     +DPIF     + S+ RD+++LENQ+P 
Sbjct: 142  SNEFVEMMVLDGCFVLELFRGAAEGFKQLGYPRNDPIFAMRGSMHSIQRDMIMLENQLPL 201

Query: 661  FILEYLITSNRVDLHPNPSKYLT-ESALRFFSGMMP-------IRLQMRPRSLSNN---- 518
            F+L+ L+    + L  N  K L  E ALRFF  + P         L     SL N     
Sbjct: 202  FVLDRLL---ELQLGDNYQKGLVAELALRFFDPLTPNDEPLTKSSLNKLESSLGNTTAFD 258

Query: 517  --------HLLDLVRNALL------PPHV------ERNMSQNIRNLKLIPCAMKLQQFGI 398
                    H LD+ R +LL       P V        N   + R  +LI C  +L+  GI
Sbjct: 259  PLGYQDGLHCLDVFRRSLLRSGPKLAPKVWMKRRSHANRVADKRRQQLIHCVKELKDAGI 318

Query: 397  XXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEPLLRNLIAFEQCHIGCTNEFTSYAFLMD 218
                            NGV+EIP L I D T  L  NLIAFEQCH+ C+N+ TSY   MD
Sbjct: 319  RFKKKKTDRFWDINFNNGVMEIPRLLIHDGTRSLFLNLIAFEQCHLDCSNDITSYVVFMD 378

Query: 217  SLISNKNDVEILQNHGIIDHWLGSDEDVMGILNKLCIEVNLDY-EFYFSELCEQVNNYCK 41
            +LI +  DV  L   GII+HWLGSDE+V  + N+LC EV  D  + Y S+L E VN Y  
Sbjct: 379  NLIDSHEDVSYLHYCGIIEHWLGSDEEVAELFNRLCQEVVYDINDSYLSQLSEDVNRYYN 438

Query: 40   MKWHRWRADLRRD 2
             +W+ WRA L+ +
Sbjct: 439  HRWNAWRATLKHN 451


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