BLASTX nr result

ID: Coptis23_contig00023392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023392
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29002.3| unnamed protein product [Vitis vinifera]              197   9e-49
ref|XP_002268236.1| PREDICTED: E2F-associated phosphoprotein iso...   195   5e-48
ref|XP_003536736.1| PREDICTED: E2F-associated phosphoprotein-lik...   189   4e-46
ref|XP_002307158.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_003592725.1| E2F-associated phosphoprotein [Medicago trun...   184   1e-44

>emb|CBI29002.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  197 bits (502), Expect = 9e-49
 Identities = 99/152 (65%), Positives = 115/152 (75%), Gaps = 6/152 (3%)
 Frame = +1

Query: 106 YMDSPTGSQKTISSDDEIDYSIKPEFYDEELDTKDEKFLHKKRKGRNISDAVLSCPCCFT 285
           ++ SPT SQKTIS DDEIDYSIKPEFYD +LD KDE ++ KKRKGR  SDAVLSCP CFT
Sbjct: 6   HLKSPTDSQKTISDDDEIDYSIKPEFYDSDLDEKDELWVQKKRKGRTTSDAVLSCPGCFT 65

Query: 286 ALCYESQRHEKFVTQYRAVFVENCEIKRDQILRENSQKRKK----RKSDLGG--SYVGEV 447
            LC E QRHEK+VTQYRA+FV NC IK +Q+L + S K K+    R+SD     S  GE 
Sbjct: 66  TLCLECQRHEKYVTQYRAIFVVNCNIKSEQVLPQRSIKPKRGKRGRESDKSEPVSVDGET 125

Query: 448 FKPFCCLVCATEVGVVDGDEVYHFFNVLPSEA 543
           FKP  C VC+TEVG +D DEVYHFFN+LPSE+
Sbjct: 126 FKPVHCGVCSTEVGAIDEDEVYHFFNILPSES 157


>ref|XP_002268236.1| PREDICTED: E2F-associated phosphoprotein isoform 2 [Vitis vinifera]
          Length = 192

 Score =  195 bits (496), Expect = 5e-48
 Identities = 98/150 (65%), Positives = 113/150 (75%), Gaps = 6/150 (4%)
 Frame = +1

Query: 106 YMDSPTGSQKTISSDDEIDYSIKPEFYDEELDTKDEKFLHKKRKGRNISDAVLSCPCCFT 285
           ++ SPT SQKTIS DDEIDYSIKPEFYD +LD KDE ++ KKRKGR  SDAVLSCP CFT
Sbjct: 28  HLKSPTDSQKTISDDDEIDYSIKPEFYDSDLDEKDELWVQKKRKGRTTSDAVLSCPGCFT 87

Query: 286 ALCYESQRHEKFVTQYRAVFVENCEIKRDQILRENSQKRKK----RKSDLGG--SYVGEV 447
            LC E QRHEK+VTQYRA+FV NC IK +Q+L + S K K+    R+SD     S  GE 
Sbjct: 88  TLCLECQRHEKYVTQYRAIFVVNCNIKSEQVLPQRSIKPKRGKRGRESDKSEPVSVDGET 147

Query: 448 FKPFCCLVCATEVGVVDGDEVYHFFNVLPS 537
           FKP  C VC+TEVG +D DEVYHFFN+LPS
Sbjct: 148 FKPVHCGVCSTEVGAIDEDEVYHFFNILPS 177


>ref|XP_003536736.1| PREDICTED: E2F-associated phosphoprotein-like [Glycine max]
          Length = 160

 Score =  189 bits (479), Expect = 4e-46
 Identities = 91/151 (60%), Positives = 112/151 (74%), Gaps = 7/151 (4%)
 Frame = +1

Query: 112 DSPTGSQKTISSDDEIDYSIKPEFYDEELDTKDEKFLHKKRKGRNISDAVLSCPCCFTAL 291
           DSPT SQ+T+S DDEIDY+ KPEFYD +LD  DEK++ KKR G + SDAVLSCP CFT L
Sbjct: 11  DSPTNSQQTVSDDDEIDYTTKPEFYDPDLDDNDEKWIDKKRHGHD-SDAVLSCPACFTTL 69

Query: 292 CYESQRHEKFVTQYRAVFVENCEIKRDQILRENSQKRKKRK-------SDLGGSYVGEVF 450
           C E QRHEK++TQYRAVFV NC+I  D++L++N+ + +KR         D   S   E F
Sbjct: 70  CLECQRHEKYLTQYRAVFVVNCKIGNDKVLKQNTSRSRKRNRGKEGFDGDDAHSTNIETF 129

Query: 451 KPFCCLVCATEVGVVDGDEVYHFFNVLPSEA 543
           K  CC VC+TEVGV+D DE+YHFFNVLPSE+
Sbjct: 130 KQVCCSVCSTEVGVIDQDEIYHFFNVLPSES 160


>ref|XP_002307158.1| predicted protein [Populus trichocarpa] gi|222856607|gb|EEE94154.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  187 bits (475), Expect = 1e-45
 Identities = 91/150 (60%), Positives = 111/150 (74%), Gaps = 5/150 (3%)
 Frame = +1

Query: 109 MDSPTGSQKTISSDDEIDYSIKPEFYDEELDTKDEKFLHKKRKGRNISDAVLSCPCCFTA 288
           M SP+ SQ+TIS DDEIDYS+KPEFYD ELD KDE ++ KKRKG N SDAVLSCP CFT 
Sbjct: 1   MGSPSNSQQTISDDDEIDYSVKPEFYDPELDDKDELWVQKKRKGSN-SDAVLSCPACFTT 59

Query: 289 LCYESQRHEKFVTQYRAVFVENCEIKRDQILRENSQ-KRKKRKSDLGGSYV----GEVFK 453
           LC + QRHE+FVTQYRA+FV NC++  +++     + KR KR  + G +      GE FK
Sbjct: 60  LCLDCQRHERFVTQYRAIFVVNCKVDSNKVQHSRQKPKRNKRSREAGENEADLADGETFK 119

Query: 454 PFCCLVCATEVGVVDGDEVYHFFNVLPSEA 543
             CC VC+TEVGV+D D+VYHFFN LPSE+
Sbjct: 120 AVCCSVCSTEVGVIDEDDVYHFFNALPSES 149


>ref|XP_003592725.1| E2F-associated phosphoprotein [Medicago truncatula]
           gi|355481773|gb|AES62976.1| E2F-associated
           phosphoprotein [Medicago truncatula]
          Length = 157

 Score =  184 bits (467), Expect = 1e-44
 Identities = 91/152 (59%), Positives = 108/152 (71%), Gaps = 9/152 (5%)
 Frame = +1

Query: 115 SPTGSQKTISSDDEIDYSIKPEFYDEELDTKDEKFLHKKRKGRNISDAVLSCPCCFTALC 294
           SP  S++ +S DDEIDYS KPEFYD ELD KDEK++HKK+ GR  SDAVLSCP CFT LC
Sbjct: 8   SPANSEQIVSDDDEIDYSTKPEFYDPELDDKDEKWIHKKKHGR--SDAVLSCPACFTTLC 65

Query: 295 YESQRHEKFVTQYRAVFVENCEIKRDQI-----LRENSQKRKKRKSDLGGSYV----GEV 447
            E QRHEK++TQYRA+FV NC+I+  Q+      R  S+KR +R     GS       E 
Sbjct: 66  LECQRHEKYLTQYRAIFVSNCKIEDKQVPIQSSSRSRSKKRNRRNEGFDGSDAISTSNET 125

Query: 448 FKPFCCLVCATEVGVVDGDEVYHFFNVLPSEA 543
            K  CC VC+TEVGV+D DEVYHFFNVLPSE+
Sbjct: 126 IKQVCCSVCSTEVGVIDEDEVYHFFNVLPSES 157


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