BLASTX nr result

ID: Coptis23_contig00023371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023371
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285378.1| PREDICTED: biotin carboxyl carrier protein o...   303   6e-80
emb|CAN68457.1| hypothetical protein VITISV_031448 [Vitis vinifera]   265   1e-68
ref|XP_003543673.1| PREDICTED: biotin carboxyl carrier protein o...   258   2e-66
ref|NP_188190.1| putative acetyl-CoA carboxylase biotin-containi...   253   4e-65
ref|XP_003546124.1| PREDICTED: biotin carboxyl carrier protein o...   250   3e-64

>ref|XP_002285378.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase [Vitis vinifera]
           gi|297743403|emb|CBI36270.3| unnamed protein product
           [Vitis vinifera]
          Length = 274

 Score =  303 bits (775), Expect = 6e-80
 Identities = 165/275 (60%), Positives = 196/275 (71%), Gaps = 3/275 (1%)
 Frame = +1

Query: 22  MATCNLGGTSTIQHSKLNFTRSRSGNLHPLYGIRPWKMQNAQQFTGLVLSRRSSDAFIVS 201
           MA+C LG  S I+ S L+  R+R G L   + IR          +GLV+S+RS  A I+ 
Sbjct: 1   MASCGLGAPS-IKISNLDLVRTRLGVLQSRFSIRTSTAWTPLNNSGLVISQRSQKAIILC 59

Query: 202 CGPSSEIESATNLEDELEGKGSAEPASQTVPSSFEVESLISEICDTAAIAEFELKFGGFR 381
            G SSE ESA NLED  E   S+   SQ  P+++EVESL+SEICDT +IAEFELK GGFR
Sbjct: 60  RGSSSEAESAVNLEDGSEETKSSGLTSQLTPNAYEVESLLSEICDTTSIAEFELKLGGFR 119

Query: 382 LYLTRDLAGXXXXXXXXXXXTVGTNVTVQTPDSNGSVTTHALAISKPT---GETRTLFEK 552
           LY+ RDLAG            V  ++  + P  NGS +  +L ISK     G+++TL ++
Sbjct: 120 LYMMRDLAGKIEPTPPPSSTPVTVSLNDEAPKLNGSASMSSLPISKSALLLGQSQTLLDR 179

Query: 553 ATDEGLVILNSPRVGFFRRSRTIKGKRAPPPCKENQIVKEGQVLCYIEQLGGEIPIESDV 732
           A DEGL+IL SP+VGFFRRSRTIKGKRAPP CKE QIVKEGQVLCYIEQLGGEIPIESDV
Sbjct: 180 AADEGLMILQSPKVGFFRRSRTIKGKRAPPSCKEKQIVKEGQVLCYIEQLGGEIPIESDV 239

Query: 733 SGEVVKILRKDGEPVGYGDALLEILPSFPGIKKLQ 837
           SGEV+KILR+DGEPVGYGDAL+ ILPSFPGIKKLQ
Sbjct: 240 SGEVIKILREDGEPVGYGDALIAILPSFPGIKKLQ 274


>emb|CAN68457.1| hypothetical protein VITISV_031448 [Vitis vinifera]
          Length = 252

 Score =  265 bits (677), Expect = 1e-68
 Identities = 137/209 (65%), Positives = 160/209 (76%), Gaps = 3/209 (1%)
 Frame = +1

Query: 220 IESATNLEDELEGKGSAEPASQTVPSSFEVESLISEICDTAAIAEFELKFGGFRLYLTRD 399
           + SA NLED  E   S+   SQ  P+++EVESL+SEICDT +IAEFELK GGFRLY+ RD
Sbjct: 44  VGSAVNLEDGSEETKSSGLTSQLTPNAYEVESLLSEICDTTSIAEFELKLGGFRLYMMRD 103

Query: 400 LAGXXXXXXXXXXXTVGTNVTVQTPDSNGSVTTHALAISKPT---GETRTLFEKATDEGL 570
           LAG            V  ++  + P  NGS +  +L ISK     G+++TL ++A DEGL
Sbjct: 104 LAGKIEPTPPPSSTPVTVSLNDEAPKLNGSASMSSLPISKSALLLGQSQTLLDRAADEGL 163

Query: 571 VILNSPRVGFFRRSRTIKGKRAPPPCKENQIVKEGQVLCYIEQLGGEIPIESDVSGEVVK 750
           +IL SP+VGFFRRSRTIKGKRAPP CKE QIVKEGQVLCYIEQLGGEIPIESDVSGEV+K
Sbjct: 164 MILQSPKVGFFRRSRTIKGKRAPPSCKEKQIVKEGQVLCYIEQLGGEIPIESDVSGEVIK 223

Query: 751 ILRKDGEPVGYGDALLEILPSFPGIKKLQ 837
           ILR+DGEPVGYGDAL+ ILPSFPGIKKLQ
Sbjct: 224 ILREDGEPVGYGDALIAILPSFPGIKKLQ 252


>ref|XP_003543673.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 1, chloroplastic-like [Glycine max]
          Length = 298

 Score =  258 bits (658), Expect = 2e-66
 Identities = 145/285 (50%), Positives = 190/285 (66%), Gaps = 6/285 (2%)
 Frame = +1

Query: 1   TFHHTSIMATCNLGGTSTIQHSKLNFTRSRSGNLHPLYGIRPWKMQNAQQFTGLVLSRRS 180
           +F  T  MA+C++G T  I+   L+F   + G L   +G R W  +   Q+T LV+SR++
Sbjct: 19  SFCFTFSMASCSIG-TPNIKVLNLHFGGKKVG-LSRQFGTRSWISR--LQYTSLVMSRQT 74

Query: 181 SDAFIVSCGPSSEIESATNLEDELEGKGSAEPASQTVPSSFEVESLISEICDTAAIAEFE 360
                 S GPS+EI+ A   E   E + S    S+ +P+  EVE L++++CDT++I E +
Sbjct: 75  VRFLASSNGPSTEIQFAARSEGSEEIRSSGL-TSELIPNINEVEFLLTKLCDTSSIGELD 133

Query: 361 LKFGGFRLYLTRDLAGXXXXXXXXXXXTVGTNVTVQTPDSNGSVTTHALAISKP------ 522
           LK  GF L++ RDL             +V      +TP +NGSV T +LA+SKP      
Sbjct: 134 LKLAGFHLHVVRDLTEKTKTLPPLIPASVSIINVTETPKTNGSVPTTSLAVSKPVDPVPS 193

Query: 523 TGETRTLFEKATDEGLVILNSPRVGFFRRSRTIKGKRAPPPCKENQIVKEGQVLCYIEQL 702
           +G  +   +KA DEGLVI+ SP+VGFFRRSRTIKGKRAPP CKE Q V+EGQV+CYIEQL
Sbjct: 194 SGSIQRFLDKAADEGLVIIQSPKVGFFRRSRTIKGKRAPPSCKEKQNVEEGQVICYIEQL 253

Query: 703 GGEIPIESDVSGEVVKILRKDGEPVGYGDALLEILPSFPGIKKLQ 837
           GGE+PIESDVSGEV+KILR+DG+PVGYGDAL+ ILPSFPGIKKLQ
Sbjct: 254 GGELPIESDVSGEVIKILRQDGDPVGYGDALVAILPSFPGIKKLQ 298


>ref|NP_188190.1| putative acetyl-CoA carboxylase biotin-containing subunit
           [Arabidopsis thaliana] gi|23306376|gb|AAN17415.1|
           putative acetyl-CoA carboxylase biotin-containing
           subunit [Arabidopsis thaliana]
           gi|24899719|gb|AAN65074.1| putative acetyl-CoA
           carboxylase biotin-containing subunit [Arabidopsis
           thaliana] gi|332642194|gb|AEE75715.1| putative
           acetyl-CoA carboxylase biotin-containing subunit
           [Arabidopsis thaliana]
          Length = 263

 Score =  253 bits (647), Expect = 4e-65
 Identities = 141/272 (51%), Positives = 181/272 (66%)
 Frame = +1

Query: 22  MATCNLGGTSTIQHSKLNFTRSRSGNLHPLYGIRPWKMQNAQQFTGLVLSRRSSDAFIVS 201
           MA+C+LG    I+ S ++ +R RSG+L   Y  R    Q   ++  L  +  S  A  VS
Sbjct: 1   MASCSLG-VPKIKISAVDLSRVRSGSLLIPYNQRSLLRQRPVKYLSLKTTFGSVKAVQVS 59

Query: 202 CGPSSEIESATNLEDELEGKGSAEPASQTVPSSFEVESLISEICDTAAIAEFELKFGGFR 381
             P++E  +   ++D  E K S   A Q VP   EVE+L++EICD+++IAEFELK GGFR
Sbjct: 60  TVPTAETSATIEVKDSKEIKSSRLNA-QLVPKPSEVEALVTEICDSSSIAEFELKLGGFR 118

Query: 382 LYLTRDLAGXXXXXXXXXXXTVGTNVTVQTPDSNGSVTTHALAISKPTGETRTLFEKATD 561
           LY+ R++A               +N T ++P+SNGS ++ +LAISKP          A D
Sbjct: 119 LYVARNIADNSSLQPPPTPAVTASNATTESPESNGSASSTSLAISKPASS-------AAD 171

Query: 562 EGLVILNSPRVGFFRRSRTIKGKRAPPPCKENQIVKEGQVLCYIEQLGGEIPIESDVSGE 741
           +GL+IL SP+VGFFRRS+TIKGKR P  CKE   VKEGQ+LCYIEQLGG+ PIESDV+GE
Sbjct: 172 QGLMILQSPKVGFFRRSKTIKGKRLPSSCKEKDQVKEGQILCYIEQLGGQFPIESDVTGE 231

Query: 742 VVKILRKDGEPVGYGDALLEILPSFPGIKKLQ 837
           VVKILR+DGEPVGY DAL+ ILPSFPGIKKLQ
Sbjct: 232 VVKILREDGEPVGYNDALISILPSFPGIKKLQ 263


>ref|XP_003546124.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 1, chloroplastic-like [Glycine max]
          Length = 269

 Score =  250 bits (639), Expect = 3e-64
 Identities = 140/278 (50%), Positives = 184/278 (66%), Gaps = 6/278 (2%)
 Frame = +1

Query: 22  MATCNLGGTSTIQHSKLNFTRSRSGNLHPLYGIRPWKMQNAQQFTGLVLSRRSSDAFIVS 201
           MA+C++G T  I+   L+F   + G L   +G R W  + + Q+T LV+SR+      V 
Sbjct: 1   MASCSIG-TPNIKALNLHFGGKKVG-LSQQFGTRSWISKQSLQYTSLVMSRQK-----VR 53

Query: 202 CGPSSEIESATNLEDELEGKGSAEPASQTVPSSFEVESLISEICDTAAIAEFELKFGGFR 381
             P+ EI+  T  E   E K S    S+ +P+  EVE L++++CDT++I E +LK  GF 
Sbjct: 54  FSPT-EIQFVTRSEGSEEVKSSGL-TSELIPNLIEVEFLLTKLCDTSSIGELDLKLAGFH 111

Query: 382 LYLTRDLAGXXXXXXXXXXXTVGTNVTVQTPDSNGSVTTHALAISKP------TGETRTL 543
           L++ RDL             +       +TP +NGSV+T +LA+SKP      +G  +  
Sbjct: 112 LHVVRDLTEKTKTLPPPIPASESIINVTETPKTNGSVSTTSLAVSKPVDPIPSSGSIQRF 171

Query: 544 FEKATDEGLVILNSPRVGFFRRSRTIKGKRAPPPCKENQIVKEGQVLCYIEQLGGEIPIE 723
             KA DEGLVI+ SP+VGFFRRSRTIKG+RAPP CKE Q V+EGQV+CYIEQLGGE+PIE
Sbjct: 172 LNKAADEGLVIIQSPKVGFFRRSRTIKGRRAPPSCKEKQNVEEGQVICYIEQLGGELPIE 231

Query: 724 SDVSGEVVKILRKDGEPVGYGDALLEILPSFPGIKKLQ 837
           SDVSGEV+KIL+KDG+PVGYGDAL+ ILPSFPGIKKLQ
Sbjct: 232 SDVSGEVIKILQKDGDPVGYGDALVAILPSFPGIKKLQ 269


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