BLASTX nr result

ID: Coptis23_contig00023369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023369
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE50885.1| hypothetical protein OsJ_31363 [Oryza sativa Japo...   261   8e-68
gb|EEE55079.1| hypothetical protein OsJ_02812 [Oryza sativa Japo...   261   1e-67
ref|NP_001175358.1| Os08g0112000 [Oryza sativa Japonica Group] g...   253   2e-65
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...   249   2e-64
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...   249   2e-64

>gb|EEE50885.1| hypothetical protein OsJ_31363 [Oryza sativa Japonica Group]
          Length = 1291

 Score =  261 bits (667), Expect = 8e-68
 Identities = 123/213 (57%), Positives = 159/213 (74%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2    LGKVVAHVHVIEFQKRGLPHAHVLLILDEDDKITTAEDYDKIVRAEIPDPTLEPELYEIV 181
            LGKV+AHV+V+EFQKRGLPHAH LLI+    K+T+A+ YD IV AE+PD     ELY++V
Sbjct: 899  LGKVIAHVYVVEFQKRGLPHAHFLLIMSGRYKLTSADQYDCIVSAELPDKKKYRELYDMV 958

Query: 182  VKHMIHGPCGNLNPQCVCMKDQKCSKNFPKQFAPVTNQGSDSYAVYMRRNNGAFTVVQSR 361
            VKHM+HGPCG LN +C CM+D KC  N+P+QF P T+QG DSY +Y RRN+G   VV   
Sbjct: 959  VKHMMHGPCGPLNGKCQCMRDGKCRNNYPRQFNPTTSQGKDSYPLYRRRNDGKSRVV--- 1015

Query: 362  RRSYCVDNRWVVPYNLWLLKKYNFHINVEVCSSVKSVKYLYKYIYKGSDRVALEVSSENK 541
             R + +DNRWVV YN +LL+ YN H+NVEVCSS+K+VKYL+KY+YKG DR ++ ++  + 
Sbjct: 1016 -RGHPLDNRWVVSYNPYLLRMYNCHMNVEVCSSIKAVKYLFKYLYKGHDRASISINEADS 1074

Query: 542  N-EQDEIK*YVDGRWICPQEALWRIFEFPLSQI 637
            N E DEI+ Y D RW+ P EALWRI+ F +  I
Sbjct: 1075 NGEIDEIQRYRDARWVTPPEALWRIYGFDICHI 1107


>gb|EEE55079.1| hypothetical protein OsJ_02812 [Oryza sativa Japonica Group]
          Length = 1107

 Score =  261 bits (666), Expect = 1e-67
 Identities = 121/213 (56%), Positives = 159/213 (74%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2    LGKVVAHVHVIEFQKRGLPHAHVLLILDEDDKITTAEDYDKIVRAEIPDPTLEPELYEIV 181
            LGKV+AHV+V+EFQKRGLPHAH LLI+    K+T+AE YD+IV AE+PD    PELY +V
Sbjct: 719  LGKVIAHVYVVEFQKRGLPHAHFLLIMSGRYKLTSAEQYDRIVSAELPDKKKYPELYNMV 778

Query: 182  VKHMIHGPCGNLNPQCVCMKDQKCSKNFPKQFAPVTNQGSDSYAVYMRRNNGAFTVVQSR 361
            VKHM+HGPCG LN +C CM+D KC  N+ ++F   T+QG DSY +Y RRN+    VV   
Sbjct: 779  VKHMMHGPCGRLNGRCQCMRDGKCRNNYLREFNTTTSQGKDSYPLYRRRNDSKSKVV--- 835

Query: 362  RRSYCVDNRWVVPYNLWLLKKYNFHINVEVCSSVKSVKYLYKYIYKGSDRVALEVSSENK 541
             R + +DNRWVVPYN +LL+ YN H+NVE+CSS+K+VKYL+KY+YKG D+ ++ ++  +K
Sbjct: 836  -RGHPLDNRWVVPYNPYLLRMYNCHMNVEICSSIKAVKYLFKYLYKGHDKASISINEADK 894

Query: 542  N-EQDEIK*YVDGRWICPQEALWRIFEFPLSQI 637
            N E DEI+ Y D RW+ P EALWRI+ F +  I
Sbjct: 895  NGEIDEIQRYRDARWVTPPEALWRIYGFDICHI 927


>ref|NP_001175358.1| Os08g0112000 [Oryza sativa Japonica Group]
            gi|255678104|dbj|BAH94086.1| Os08g0112000 [Oryza sativa
            Japonica Group]
          Length = 1481

 Score =  253 bits (647), Expect = 2e-65
 Identities = 118/213 (55%), Positives = 160/213 (75%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2    LGKVVAHVHVIEFQKRGLPHAHVLLILDEDDKITTAEDYDKIVRAEIPDPTLEPELYEIV 181
            LGKV+AHV+V EFQKRGLPHAH LLI+    K+T+A+ YD I+ AE+PD     ELY++V
Sbjct: 731  LGKVIAHVYV-EFQKRGLPHAHFLLIMSSRYKLTSADQYDCIISAELPDKKKYRELYDMV 789

Query: 182  VKHMIHGPCGNLNPQCVCMKDQKCSKNFPKQFAPVTNQGSDSYAVYMRRNNGAFTVVQSR 361
            VKHM+HGPCG LN +C CM+D KC  N+P++F P T+QG DSY +Y RRN+G   +V   
Sbjct: 790  VKHMMHGPCGPLNGKCQCMRDGKCRNNYPREFNPTTSQGKDSYPLYRRRNDGKSRMV--- 846

Query: 362  RRSYCVDNRWVVPYNLWLLKKYNFHINVEVCSSVKSVKYLYKYIYKGSDRVALEVS-SEN 538
             R + +DNRWVVPYN +LL+ YN ++NVEVCSS+K++KYL+KY+YKG +R ++ ++ ++N
Sbjct: 847  -RGHPLDNRWVVPYNPYLLRMYNCYMNVEVCSSIKAIKYLFKYLYKGHERASISINEADN 905

Query: 539  KNEQDEIK*YVDGRWICPQEALWRIFEFPLSQI 637
              E DEI+ Y D RW+ P EALWRI+ F +  I
Sbjct: 906  NGEIDEIQRYRDARWVTPPEALWRIYGFDICHI 938


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score =  249 bits (637), Expect = 2e-64
 Identities = 120/214 (56%), Positives = 153/214 (71%), Gaps = 1/214 (0%)
 Frame = +2

Query: 2    LGKVVAHVHVIEFQKRGLPHAHVLLILDEDDKITTAEDYDKIVRAEIPDPTLEPELYEIV 181
            LGKV+A+ +V+EFQKRGLPHAH LLI+D   K+T+ E YD I+ AE+P+    PELYE+V
Sbjct: 509  LGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLTSPEQYDCIISAELPNKHKYPELYEMV 568

Query: 182  VKHMIHGPCGNLNPQCVCMKDQKCSKNFPKQFAPVTNQGSDSYAVYMRRNNGAFTVVQSR 361
            VKHM+HGPCG LN + VCM+D  C   +P+ F  VT  G DSY VY RR+N     V   
Sbjct: 569  VKHMMHGPCGTLNRKNVCMQDGSCKNRYPRAFNAVTINGKDSYPVYRRRDNKRCAKV--- 625

Query: 362  RRSYCVDNRWVVPYNLWLLKKYNFHINVEVCSSVKSVKYLYKYIYKGSDRVALEVSSENK 541
             R   +DNRWVVPYN +LL+ YN HINVEVCSS+K+VKYL+KYIYKG DR ++ +   + 
Sbjct: 626  -RKQMLDNRWVVPYNPYLLRMYNCHINVEVCSSIKAVKYLFKYIYKGHDRASVTLGEADS 684

Query: 542  NEQ-DEIK*YVDGRWICPQEALWRIFEFPLSQIY 640
            N   DEI+ Y D RW+ P EALWRI+ F LS+++
Sbjct: 685  NGNIDEIQQYRDARWVTPPEALWRIYSFDLSKVH 718


>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
            gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
            Japonica Group]
          Length = 1575

 Score =  249 bits (637), Expect = 2e-64
 Identities = 120/214 (56%), Positives = 153/214 (71%), Gaps = 1/214 (0%)
 Frame = +2

Query: 2    LGKVVAHVHVIEFQKRGLPHAHVLLILDEDDKITTAEDYDKIVRAEIPDPTLEPELYEIV 181
            LGKV+A+ +V+EFQKRGLPHAH LLI+D   K+T+ E YD I+ AE+P+    PELYE+V
Sbjct: 668  LGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLTSPEQYDCIISAELPNKHKYPELYEMV 727

Query: 182  VKHMIHGPCGNLNPQCVCMKDQKCSKNFPKQFAPVTNQGSDSYAVYMRRNNGAFTVVQSR 361
            VKHM+HGPCG LN + VCM+D  C   +P+ F  VT  G DSY VY RR+N     V   
Sbjct: 728  VKHMMHGPCGTLNRKNVCMQDGSCKNRYPRAFNAVTINGKDSYPVYRRRDNKRCAKV--- 784

Query: 362  RRSYCVDNRWVVPYNLWLLKKYNFHINVEVCSSVKSVKYLYKYIYKGSDRVALEVSSENK 541
             R   +DNRWVVPYN +LL+ YN HINVEVCSS+K+VKYL+KYIYKG DR ++ +   + 
Sbjct: 785  -RKQMLDNRWVVPYNPYLLRMYNCHINVEVCSSIKAVKYLFKYIYKGHDRASVTLGEADS 843

Query: 542  NEQ-DEIK*YVDGRWICPQEALWRIFEFPLSQIY 640
            N   DEI+ Y D RW+ P EALWRI+ F LS+++
Sbjct: 844  NGNIDEIQQYRDARWVTPPEALWRIYSFDLSKVH 877


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