BLASTX nr result

ID: Coptis23_contig00023361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023361
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW88183.1| hypothetical protein ZEAMMB73_105336 [Zea mays]         79   2e-12
ref|XP_003890124.1| hypothetical protein PGTG_21261 [Puccinia gr...    79   3e-12
ref|XP_003888550.1| hypothetical protein PGTG_22695 [Puccinia gr...    74   5e-11
ref|XP_003322560.1| hypothetical protein PGTG_04097 [Puccinia gr...    74   9e-11
ref|XP_003326641.2| hypothetical protein PGTG_07619 [Puccinia gr...    72   3e-10

>gb|AFW88183.1| hypothetical protein ZEAMMB73_105336 [Zea mays]
          Length = 807

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 76/283 (26%), Positives = 121/283 (42%), Gaps = 27/283 (9%)
 Frame = -2

Query: 1126 DVVVGTGQNRHVFFEKIADEMNKRMSQLGHAGQPRTGGSVQARFHIIQHAVSLFQGYYDQ 947
            D +V TGQ R  F+ +I +  N R   +      R+  S+ +R+  I+   S F GY   
Sbjct: 541  DPIVNTGQKRQGFWNRITEAYNSRRGSMPE----RSTKSLMSRWDSIKTQCSTFAGYMMA 596

Query: 946  QLRMNASGTNADDTMSRARTIFLTVQKEHFKFEHCYWILILSPKWNHLYQAXXXXXXXXX 767
             LR N SG    D  S A T F  V+K+ F F HC+ IL   PKW   +           
Sbjct: 597  VLRQNPSGMTDADKTSLAATRFAAVEKKPFHFLHCWSILKDQPKWMDQHMG--------- 647

Query: 766  XXXXXXXXXXXXXXXSTANNIGIANISLD----EESQPSREVPGSEKRPKGR-----KFK 614
                              N IG  + ++D    E+S PS     + KRP GR     K K
Sbjct: 648  ------------NQNPPPNPIGTQSNTIDLDAGEDSAPS---SFTSKRPLGRDSAKEKAK 692

Query: 613  KRDADEVAHQMAQTLEEVRDNQL-----------TTAKYLQEQTELKRQMFLSMKKEKED 467
            K+ ++  +   ++ L  + +  L           T  K L+   + +RQ  +  +K+   
Sbjct: 693  KQRSENTSSTDSEYLTRMGELSLERLSVYKSVASTEEKKLEFMKKQERQKLILERKKLNL 752

Query: 466  EILRLEAQKEQD-------IMMLDLSKFSGIQLTFWEAKQAAI 359
            E +++E QK ++       I+ +DL+K + +   ++EAKQ  I
Sbjct: 753  EKMKMERQKVKEETEQKVLILSMDLTKCNPVLRQYYEAKQQEI 795


>ref|XP_003890124.1| hypothetical protein PGTG_21261 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3] gi|375165313|gb|EHS62889.1| hypothetical
            protein PGTG_21261 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 339

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 10/266 (3%)
 Frame = -2

Query: 1126 DVVVGTGQNRHVFFEKI----AD---EMNK--RMSQLGHAGQPRTGGSVQARFHIIQHAV 974
            D +VG GQ    F+E++    AD   + NK  + S+       R   +++ R+  I    
Sbjct: 88   DSIVGAGQKAGTFWERVHQLYADFVVDFNKDHKNSKTQKPLPVRPTNAIECRWGHILRVC 147

Query: 973  SLFQGYYDQQLRMNASGTNADDTMSRARTIFLTVQKEHFKFEHCYWILILSPKWNHLYQA 794
            + F G Y Q  R   SG + DD ++ A+ ++ +  +  F  +HC+ IL   PKW    Q 
Sbjct: 148  NKFGGSYSQVERRMRSGMSRDDVLAEAKELYKSENESTFNLDHCWAILREHPKWQATQQ- 206

Query: 793  XXXXXXXXXXXXXXXXXXXXXXXXSTANNIGIANISLDEE-SQPSREVPGSEKRPKGRKF 617
                                     TA +   A+   DEE  Q +R   GSE RP+G K 
Sbjct: 207  -----EIDLKAKKSKQPSNTPTTDDTAQSSSQADTQPDEEDEQSTRSALGSESRPEGNKA 261

Query: 616  KKRDADEVAHQMAQTLEEVRDNQLTTAKYLQEQTELKRQMFLSMKKEKEDEILRLEAQKE 437
             KR  DE A      LE++   Q       +E  ++ ++   S++K  ++     +++ +
Sbjct: 262  AKRKRDEDA-----MLEKIIRTQ-------EELVKISKERSASVQKAMQEASAAKQSEAD 309

Query: 436  QDIMMLDLSKFSGIQLTFWEAKQAAI 359
              IM +D+S        +W+ K+ AI
Sbjct: 310  DRIMAMDISGLDEEAKAYWQKKRRAI 335


>ref|XP_003888550.1| hypothetical protein PGTG_22695 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3] gi|375165107|gb|EHS62843.1| hypothetical
            protein PGTG_22695 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 338

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 6/263 (2%)
 Frame = -2

Query: 1129 EDVVVGTGQNRHVFFEKIADEMNKRMSQLGHAGQPRTGGSVQARFHIIQHAVSLFQGYYD 950
            +D +VGTGQ    F+E+     NKR   +      R   +++ R+  I    + F G Y 
Sbjct: 101  QDSIVGTGQKAGTFWER----ENKRSKTIKPL-PVRLVNAIECRWGHIMRVCNKFGGCYS 155

Query: 949  QQLRMNASGTNADDTMSRARTIFLTVQKEHFKFEHCYWILILSPKWNHLYQAXXXXXXXX 770
            Q  R   SG + DD +S A+ ++ +  K  F   HC+ IL   PKW    Q         
Sbjct: 156  QVERCMRSGMSQDDILSEAKELYKSENKSAFNLNHCWGILREHPKWQATQQEINLRQKKS 215

Query: 769  XXXXXXXXXXXXXXXXSTANNIGIANISLDEESQPSREVPGSEKRPKGRKF--KKRDADE 596
                            S           LD++    R   GS+ RP+G K   +KR+ D 
Sbjct: 216  KDPPSSTPATNEALPLSPQ-----TTTQLDDDD--DRSALGSDARPEGNKAAKRKREEDA 268

Query: 595  VAHQMAQTLEEV----RDNQLTTAKYLQEQTELKRQMFLSMKKEKEDEILRLEAQKEQDI 428
            +  ++ +T E++    ++   +  K L+E  E K+Q                  + +  I
Sbjct: 269  ILQKIIKTQEDLVKISKERSASVQKALEEAAEAKKQ------------------EADDHI 310

Query: 427  MMLDLSKFSGIQLTFWEAKQAAI 359
            M++DLS        +W+ K+ AI
Sbjct: 311  MVMDLSGMDDEAKAYWQKKRRAI 333


>ref|XP_003322560.1| hypothetical protein PGTG_04097 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3] gi|309301550|gb|EFP78141.1| hypothetical
            protein PGTG_04097 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 310

 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 38/107 (35%), Positives = 63/107 (58%)
 Frame = -2

Query: 1129 EDVVVGTGQNRHVFFEKIADEMNKRMSQLGHAGQPRTGGSVQARFHIIQHAVSLFQGYYD 950
            ED ++GT Q+   F++++    +K + +       RT GS++A +  +Q  VS F+G+ +
Sbjct: 70   EDPLIGTNQDGATFWKRVHQSFSKDLPE-----SRRTPGSLKAHWGALQKVVSKFRGFVN 124

Query: 949  QQLRMNASGTNADDTMSRARTIFLTVQKEHFKFEHCYWILILSPKWN 809
            Q  +   SG +A+D ++RA  +F T QK  FK+  CY IL+  PKWN
Sbjct: 125  QVEQFGESGASAEDCLNRALELFSTDQKCSFKYLRCYNILVKIPKWN 171


>ref|XP_003326641.2| hypothetical protein PGTG_07619 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3] gi|375166710|gb|EFP82222.2| hypothetical
            protein PGTG_07619 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 357

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 10/253 (3%)
 Frame = -2

Query: 1129 EDVVVGTGQNRHVFFEKIADEMNKRMSQLGHAGQPRTGGSVQARFHIIQHAVSLFQGYYD 950
            ED  VGT Q    F+++I+   +  + Q      PR  GS++ R+ +I H VS F G   
Sbjct: 61   EDPSVGTDQASTRFWDRISKCYHDAIPQ-----PPRPIGSIKGRWQLISHGVSKFTGCVK 115

Query: 949  QQLRMNASGTNADDTMSRARTIFLTVQKEHFKFEHCYWILILSPKWNHLYQAXXXXXXXX 770
               R+NASG  ++D +++A ++F  +Q + F +  CY IL+ SPKW   +Q         
Sbjct: 116  HIDRLNASGATSEDRLTQALSLFAELQGKTFTYLRCYNILVSSPKWTEYFQ-DLEARHVD 174

Query: 769  XXXXXXXXXXXXXXXXSTANNIGIANISLDEESQPSREVPGSEKRPKGRKFKK---RDAD 599
                               N+   ++     E+  +  V    +RP G+K  K   R+A 
Sbjct: 175  GSKKKKKRARSPSSEAPPLNSGQTSDTETPTETPSATPVQSEPERPVGKKKAKAFVREAT 234

Query: 598  EVAH---QMAQTLEEVRDNQLTTAKYLQEQTELKRQMFLSMKKEKE----DEILRLEAQK 440
            + A     MA    E+           Q QT+  + M  +    K+    DE+ +   + 
Sbjct: 235  QEARIMKDMALAQAEIASQSKRQNDIYQSQTQTMQTMANAAIMNKDLTGLDEVTQEFYRL 294

Query: 439  EQDIMMLDLSKFS 401
            +++ +ML L + S
Sbjct: 295  QREQIMLQLRERS 307


Top