BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023358
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
gb|ELR20582.1| zinc knuckle domain containing protein [Acanthamo...    80   2e-13
ref|ZP_11632950.1| putative DNA helicase/AAA ATPase [Moraxella c...    79   3e-13
ref|ZP_11635796.1| putative DNA helicase/AAA ATPase [Moraxella c...    79   3e-13

>ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|222840828|gb|EEE78375.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 56/131 (42%), Positives = 78/131 (59%)
 Frame = -1

Query: 395 LYPLNMHVQRVNDTRLRSLSGEIFKYTAKDTGKNPWKWQLSNGVAPDELELGMGARVMLI 216
           LYP    V++VN+ R++SL      Y A D+G    K QL+ G+ PD+L L +GARVMLI
Sbjct: 278 LYPRINDVEKVNEERMKSLGESTVTYAAADSGLEHRKKQLNQGIVPDQLVLCVGARVMLI 337

Query: 215 KNKDVGVGLVNGATGTIVDFVHHTGKKSWGAFAKCLLPKVRFDSGLERAIEPDEWHVMEG 36
            N ++   L NGATGT+  FV    K +    +  L P+V+FD G E  IEP ++ + EG
Sbjct: 338 MNLNIERNLCNGATGTVTGFVPVEDKNA--RKSDILFPQVKFDRGPEILIEPQKFEIFEG 395

Query: 35  EKALATRKQIP 3
           +  +A R QIP
Sbjct: 396 DIVVAWRYQIP 406


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
           gi|223540444|gb|EEF42013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 59/132 (44%), Positives = 75/132 (56%)
 Frame = -1

Query: 398 RLYPLNMHVQRVNDTRLRSLSGEIFKYTAKDTGKNPWKWQLSNGVAPDELELGMGARVML 219
           RLYP    V +VN+ RL+SL  +I  Y A D G    K  L  G+A D+LE+  GARVML
Sbjct: 262 RLYPRIEDVNKVNEKRLKSLGEKIVAYKAVDGGTR--KELLKQGMAQDQLEICKGARVML 319

Query: 218 IKNKDVGVGLVNGATGTIVDFVHHTGKKSWGAFAKCLLPKVRFDSGLERAIEPDEWHVME 39
           IKN  V   L NGATGT++ FV          F   LLP ++FDSG    I+P +W   E
Sbjct: 320 IKNLHVWSKLCNGATGTVIGFVEPYDDVI-DLFPDNLLPVIKFDSGKVTVIKPQKWECYE 378

Query: 38  GEKALATRKQIP 3
           G+  +A R Q+P
Sbjct: 379 GDDFVAWRSQLP 390


>gb|ELR20582.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 668

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
 Frame = -1

Query: 395 LYPLNMHVQRVNDTRLRSLSGEIFKYTAKDTGKNPWKWQLS-NGVAPDELELGMGARVML 219
           LYP    V   N  RL  L+G    Y A D+G  P++  L+ N  APD LEL + A+V+L
Sbjct: 452 LYPHRRDVDGENTKRLAELAGTSRVYRAVDSGVEPYRSMLARNCSAPDVLELKLNAQVIL 511

Query: 218 IKNKDVGVGLVNGATGTIVDF---VHHTGKKSWGAFAKCLLPKVRFDSGLERAIEPDEWH 48
           +KN D  + LVNGA G +VDF   V    K+     +K   P+V F SG+ R I P+EW+
Sbjct: 512 LKNLDSALELVNGARGVVVDFKKPVKQDNKEESYDESK-EYPEVLFTSGVRRLITPEEWN 570

Query: 47  VMEGEKALATRKQIP 3
           +    +  A R Q P
Sbjct: 571 IGVAGEPQAWRVQCP 585


>ref|ZP_11632950.1| putative DNA helicase/AAA ATPase [Moraxella catarrhalis BC7]
           gi|326571377|gb|EGE21392.1| putative DNA helicase/AAA
           ATPase [Moraxella catarrhalis BC7]
          Length = 618

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
 Frame = -1

Query: 398 RLYPLNMHVQRVNDTRLRSLSGEIFKYTAKDTGKNPWKWQLSNGV-APDELELGMGARVM 222
           RLY  N  V  +N T+L  L+ +   Y A   G+ P +  LS  V APDEL + +GA+VM
Sbjct: 226 RLYTHNADVDVINQTQLNELTAKTITYRAAKMGEKPLQESLSKSVRAPDELTVAIGAKVM 285

Query: 221 LIKNKDVGVGLVNGATGTIVDFVHHTGK--KSWGA-FAKCLLPKVRFDSGLERAIEPDEW 51
            +KN  + +G+ NG  G +V F+  +GK  K+  A  ++   P VR ++G E A EP+EW
Sbjct: 286 FVKNLPL-LGVYNGTMGEVVGFIGVSGKAYKATDADISETAYPLVRLNTGGEVAAEPEEW 344

Query: 50  HVMEGE-KALATRKQIP 3
            V + +   LA+  Q+P
Sbjct: 345 TVEDKDGTVLASYTQVP 361


>ref|ZP_11635796.1| putative DNA helicase/AAA ATPase [Moraxella catarrhalis BC8]
           gi|326569425|gb|EGE19485.1| putative DNA helicase/AAA
           ATPase [Moraxella catarrhalis BC8]
          Length = 618

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
 Frame = -1

Query: 398 RLYPLNMHVQRVNDTRLRSLSGEIFKYTAKDTGKNPWKWQLSNGV-APDELELGMGARVM 222
           RLY  N  V  +N T+L  L+ +   Y A   G+ P +  LS  V APDEL + +GA+VM
Sbjct: 226 RLYTHNADVDVINQTQLNELTAKTITYRAAKMGEKPLQESLSKSVRAPDELTVAIGAKVM 285

Query: 221 LIKNKDVGVGLVNGATGTIVDFVHHTGK--KSWGA-FAKCLLPKVRFDSGLERAIEPDEW 51
            +KN  + +G+ NG  G +V F+  +GK  K+  A  ++   P VR ++G E A EP+EW
Sbjct: 286 FVKNLPL-LGVYNGTMGEVVGFIGVSGKAYKATDADISETAYPLVRLNTGGEVAAEPEEW 344

Query: 50  HVMEGE-KALATRKQIP 3
            V + +   LA+  Q+P
Sbjct: 345 TVEDKDGTVLASYTQVP 361