BLASTX nr result

ID: Coptis23_contig00023357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023357
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534083.1| Rop guanine nucleotide exchange factor, puta...   292   2e-77
ref|XP_002309095.1| predicted protein [Populus trichocarpa] gi|2...   292   3e-77
ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f...   283   1e-74
emb|CBI30469.3| unnamed protein product [Vitis vinifera]              283   1e-74
gb|AEE89671.1| RopGEF7a [Medicago truncatula]                         283   2e-74

>ref|XP_002534083.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223525876|gb|EEF28299.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 673

 Score =  292 bits (748), Expect = 2e-77
 Identities = 143/185 (77%), Positives = 164/185 (88%), Gaps = 4/185 (2%)
 Frame = +1

Query: 10  CGLHDDSRKHLQHKRECTNQILKAAMAINTIVLSDMEVPEFYLDSLPKNGRASLGDVMHR 189
           CGLH++SRK LQHKR+CTNQ+LKAAMAIN+I L+DMEVPE YL+ LPKNG+ASLGD+++R
Sbjct: 378 CGLHENSRKELQHKRDCTNQMLKAAMAINSITLADMEVPETYLEGLPKNGKASLGDLIYR 437

Query: 190 YITSDQFSPECLLDCLALSSEHQVLEIANRVEASMYVWRQRAN----QNMNRSSSKSSWG 357
           YI+SDQF PECLLDCL LSSEHQ +E+ANRVEA+ YVWR+R N     N  RS S+SSW 
Sbjct: 438 YISSDQFLPECLLDCLDLSSEHQAIELANRVEAATYVWRKRTNSKPANNTTRSGSRSSWE 497

Query: 358 MVKEMMIDVDKRELLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRV 537
           +VKE+M D DKR+LLADRAESLLLCLKQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRV
Sbjct: 498 LVKELMTDADKRDLLADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRV 557

Query: 538 LESLA 552
           LESLA
Sbjct: 558 LESLA 562


>ref|XP_002309095.1| predicted protein [Populus trichocarpa] gi|222855071|gb|EEE92618.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  292 bits (747), Expect = 3e-77
 Identities = 144/184 (78%), Positives = 167/184 (90%), Gaps = 4/184 (2%)
 Frame = +1

Query: 13  GLHDDSRKHLQHKRECTNQILKAAMAINTIVLSDMEVPEFYLDSLPKNGRASLGDVMHRY 192
           GLH++SRK LQHKR+ TNQILKAAMAIN+I L++ME+PE YL++LPKNG+ASLGD+++RY
Sbjct: 167 GLHENSRKKLQHKRDSTNQILKAAMAINSITLAEMEIPESYLEALPKNGKASLGDLIYRY 226

Query: 193 ITSDQFSPECLLDCLALSSEHQVLEIANRVEASMYVWRQRAN----QNMNRSSSKSSWGM 360
           I+SDQF PECLLDCL LSSEHQ +E+ANRVEAS+Y+WR+R N     + NRSSSKSSW +
Sbjct: 227 ISSDQFYPECLLDCLDLSSEHQAIELANRVEASIYIWRKRTNYKPASSTNRSSSKSSWEL 286

Query: 361 VKEMMIDVDKRELLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVL 540
           VKE+MID DKRELLADRAESLLLCLKQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRVL
Sbjct: 287 VKELMIDADKRELLADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVL 346

Query: 541 ESLA 552
           ESLA
Sbjct: 347 ESLA 350


>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 701

 Score =  283 bits (725), Expect = 1e-74
 Identities = 139/185 (75%), Positives = 165/185 (89%), Gaps = 4/185 (2%)
 Frame = +1

Query: 13  GLHDDSRKHLQHKRECTNQILKAAMAINTIVLSDMEVPEFYLDSLPKNGRASLGDVMHRY 192
           GLH++SRK LQHKR+CTNQILKAAMAIN+  L++ME+PE YL+ LPKNG++SLGD++HRY
Sbjct: 368 GLHENSRKQLQHKRDCTNQILKAAMAINSTALAEMEIPESYLEVLPKNGKSSLGDLIHRY 427

Query: 193 ITSDQFSPECLLDCLALSSEHQVLEIANRVEASMYVWRQRAN----QNMNRSSSKSSWGM 360
           +TSDQFSPE LL CL LSSEHQ LEIANRVEAS+YVWR++ N     N +RS+S+SSW +
Sbjct: 428 VTSDQFSPEYLLACLDLSSEHQALEIANRVEASVYVWRRKTNSKPISNTSRSTSRSSWEI 487

Query: 361 VKEMMIDVDKRELLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVL 540
           VK++M+D DKRELLA+RAESLL C+KQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRVL
Sbjct: 488 VKDLMVDADKRELLAERAESLLHCMKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVL 547

Query: 541 ESLAS 555
           ESLAS
Sbjct: 548 ESLAS 552


>emb|CBI30469.3| unnamed protein product [Vitis vinifera]
          Length = 1231

 Score =  283 bits (725), Expect = 1e-74
 Identities = 139/185 (75%), Positives = 165/185 (89%), Gaps = 4/185 (2%)
 Frame = +1

Query: 13   GLHDDSRKHLQHKRECTNQILKAAMAINTIVLSDMEVPEFYLDSLPKNGRASLGDVMHRY 192
            GLH++SRK LQHKR+CTNQILKAAMAIN+  L++ME+PE YL+ LPKNG++SLGD++HRY
Sbjct: 898  GLHENSRKQLQHKRDCTNQILKAAMAINSTALAEMEIPESYLEVLPKNGKSSLGDLIHRY 957

Query: 193  ITSDQFSPECLLDCLALSSEHQVLEIANRVEASMYVWRQRAN----QNMNRSSSKSSWGM 360
            +TSDQFSPE LL CL LSSEHQ LEIANRVEAS+YVWR++ N     N +RS+S+SSW +
Sbjct: 958  VTSDQFSPEYLLACLDLSSEHQALEIANRVEASVYVWRRKTNSKPISNTSRSTSRSSWEI 1017

Query: 361  VKEMMIDVDKRELLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVL 540
            VK++M+D DKRELLA+RAESLL C+KQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRVL
Sbjct: 1018 VKDLMVDADKRELLAERAESLLHCMKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVL 1077

Query: 541  ESLAS 555
            ESLAS
Sbjct: 1078 ESLAS 1082



 Score =  233 bits (593), Expect = 2e-59
 Identities = 121/188 (64%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
 Frame = +1

Query: 13  GLHDDSRKHLQHKRECTNQILKAAMAINTIVLSDMEVPEFYLDSLPKNGRASLGDVMHRY 192
           GL ++SRKHLQ KR+ TNQI KA  AIN+  L++MEVPE YL++LPKN RASLGD+++RY
Sbjct: 342 GLSENSRKHLQQKRDFTNQIRKAVRAINSTTLAEMEVPEPYLEALPKNVRASLGDLIYRY 401

Query: 193 ITSDQFSPECLLDCLALSSEHQVLEIANRVEASMYVWRQRANQN----MNRSSSKSSWGM 360
           ITSDQFSPEC+L  L  +SE Q LE+ANRVEAS+ VW QR         ++ +S+ SW  
Sbjct: 402 ITSDQFSPECVLSHLDFTSE-QALEVANRVEASIIVWHQRHYPKPVSIKSQPTSRQSWKA 460

Query: 361 VKEMMIDVDKRELLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVL 540
            KE+M D DK E +A+RAESLL C+KQRFPGLPQT L+MSK+QFNKD+GKSILESYSRVL
Sbjct: 461 EKELMADADKTESIAERAESLLFCIKQRFPGLPQTTLEMSKVQFNKDIGKSILESYSRVL 520

Query: 541 ESLASKTL 564
           ESLA+  L
Sbjct: 521 ESLAADIL 528


>gb|AEE89671.1| RopGEF7a [Medicago truncatula]
          Length = 577

 Score =  283 bits (723), Expect = 2e-74
 Identities = 138/185 (74%), Positives = 161/185 (87%), Gaps = 4/185 (2%)
 Frame = +1

Query: 10  CGLHDDSRKHLQHKRECTNQILKAAMAINTIVLSDMEVPEFYLDSLPKNGRASLGDVMHR 189
           CGLH+ SRK LQHKR+CT+QILKAAMAIN+I L++M++PE YL+SLPKN R SLGDV+HR
Sbjct: 271 CGLHEKSRKQLQHKRDCTSQILKAAMAINSITLAEMDIPESYLESLPKNARISLGDVIHR 330

Query: 190 YITSDQFSPECLLDCLALSSEHQVLEIANRVEASMYVWRQRANQN----MNRSSSKSSWG 357
           YITSD FSPECLL CL LSSEHQ +EIANR EASMY+WR++ N        RSSS++SW 
Sbjct: 331 YITSDHFSPECLLACLDLSSEHQAIEIANRAEASMYIWRKKTNSKPASVSGRSSSRTSWE 390

Query: 358 MVKEMMIDVDKRELLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRV 537
           MVK++M+D DKREL A+RAE+LLL LKQRFPGLPQTALDMSKIQ+NKDVGK+ILESYSRV
Sbjct: 391 MVKDLMVDADKRELFAERAETLLLTLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRV 450

Query: 538 LESLA 552
           LESLA
Sbjct: 451 LESLA 455


Top