BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023352
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   149   2e-44
emb|CBI19841.3| unnamed protein product [Vitis vinifera]              149   2e-44
gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]             147   6e-44
ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana] ...   147   6e-44
gb|AAM97049.1| unknown protein [Arabidopsis thaliana] gi|2319793...   147   6e-44

>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score =  149 bits (376), Expect(2) = 2e-44
 Identities = 67/86 (77%), Positives = 69/86 (80%)
 Frame = +2

Query: 107 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 286
           MGVPAFYRWLAEKY                G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 287 PCFHPEDRPSPTTFDEVFQCMFDYID 364
           PCFHPEDRPSPTTFDEVFQCMFDYID
Sbjct: 61  PCFHPEDRPSPTTFDEVFQCMFDYID 86



 Score = 55.5 bits (132), Expect(2) = 2e-44
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 460 LFVMVRPRKVLYMAIDGVAPRAKMNQQ 540
           LFVMVRPRK+LYMAIDGVAPRAKMNQQ
Sbjct: 88  LFVMVRPRKLLYMAIDGVAPRAKMNQQ 114


>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
          Length = 870

 Score =  149 bits (376), Expect(2) = 2e-44
 Identities = 67/86 (77%), Positives = 69/86 (80%)
 Frame = +2

Query: 107 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 286
           MGVPAFYRWLAEKY                G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 287 PCFHPEDRPSPTTFDEVFQCMFDYID 364
           PCFHPEDRPSPTTFDEVFQCMFDYID
Sbjct: 61  PCFHPEDRPSPTTFDEVFQCMFDYID 86



 Score = 55.5 bits (132), Expect(2) = 2e-44
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 460 LFVMVRPRKVLYMAIDGVAPRAKMNQQ 540
           LFVMVRPRK+LYMAIDGVAPRAKMNQQ
Sbjct: 88  LFVMVRPRKLLYMAIDGVAPRAKMNQQ 114


>gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
          Length = 1037

 Score =  147 bits (372), Expect(2) = 6e-44
 Identities = 65/86 (75%), Positives = 70/86 (81%)
 Frame = +2

Query: 107 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 286
           MGVP+FYRWLAEKY                G+KIPVDT+KPNPNN+EYDNLYLDMNGIIH
Sbjct: 1   MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 287 PCFHPEDRPSPTTFDEVFQCMFDYID 364
           PCFHPEDRPSPTTF+EVFQCMFDYID
Sbjct: 61  PCFHPEDRPSPTTFEEVFQCMFDYID 86



 Score = 55.5 bits (132), Expect(2) = 6e-44
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 460 LFVMVRPRKVLYMAIDGVAPRAKMNQQ 540
           LFVMVRPRK+LYMAIDGVAPRAKMNQQ
Sbjct: 88  LFVMVRPRKLLYMAIDGVAPRAKMNQQ 114


>ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
           gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3'
           exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE
           3 gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis
           thaliana] gi|332197621|gb|AEE35742.1| 5'-3'
           exoribonuclease 3 [Arabidopsis thaliana]
          Length = 1020

 Score =  147 bits (372), Expect(2) = 6e-44
 Identities = 65/86 (75%), Positives = 70/86 (81%)
 Frame = +2

Query: 107 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 286
           MGVP+FYRWLAEKY                G+KIPVDT+KPNPNN+EYDNLYLDMNGIIH
Sbjct: 1   MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 287 PCFHPEDRPSPTTFDEVFQCMFDYID 364
           PCFHPEDRPSPTTF+EVFQCMFDYID
Sbjct: 61  PCFHPEDRPSPTTFEEVFQCMFDYID 86



 Score = 55.5 bits (132), Expect(2) = 6e-44
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 460 LFVMVRPRKVLYMAIDGVAPRAKMNQQ 540
           LFVMVRPRK+LYMAIDGVAPRAKMNQQ
Sbjct: 88  LFVMVRPRKLLYMAIDGVAPRAKMNQQ 114


>gb|AAM97049.1| unknown protein [Arabidopsis thaliana] gi|23197934|gb|AAN15494.1|
           unknown protein [Arabidopsis thaliana]
          Length = 763

 Score =  147 bits (372), Expect(2) = 6e-44
 Identities = 65/86 (75%), Positives = 70/86 (81%)
 Frame = +2

Query: 107 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 286
           MGVP+FYRWLAEKY                G+KIPVDT+KPNPNN+EYDNLYLDMNGIIH
Sbjct: 1   MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 287 PCFHPEDRPSPTTFDEVFQCMFDYID 364
           PCFHPEDRPSPTTF+EVFQCMFDYID
Sbjct: 61  PCFHPEDRPSPTTFEEVFQCMFDYID 86



 Score = 55.5 bits (132), Expect(2) = 6e-44
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 460 LFVMVRPRKVLYMAIDGVAPRAKMNQQ 540
           LFVMVRPRK+LYMAIDGVAPRAKMNQQ
Sbjct: 88  LFVMVRPRKLLYMAIDGVAPRAKMNQQ 114