BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023341
         (1574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   616   e-174
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   608   e-171
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              591   e-166
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   590   e-166
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   586   e-165

>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
            predicted protein [Populus trichocarpa]
          Length = 639

 Score =  616 bits (1589), Expect = e-174
 Identities = 300/415 (72%), Positives = 352/415 (84%)
 Frame = -2

Query: 1573 EEQFSSQNIVDCLKKVTAVDLRQTVKVDDELEIRGYYAGHVIGAAMFYAKVKDSALVYTG 1394
            EEQF+S +I  C++KV AVDL+QTV+VDD+L+IR YYAGHV+GAAMFYAKV DSA+VYTG
Sbjct: 117  EEQFTSLHISQCMEKVIAVDLKQTVQVDDDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTG 176

Query: 1393 DYNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYAREREFLKVVHQCVGNGGKVL 1214
            DYNMTPDRHLGAA ID+ L LDL+I+ESTYATT+R+SKYAREREFLK VH+CV  GGKVL
Sbjct: 177  DYNMTPDRHLGAAQIDR-LELDLLITESTYATTIRDSKYAREREFLKAVHECVAGGGKVL 235

Query: 1213 IPTFALGRAQELCILLDDYWERMNLNSIPIYFSAGLTLQANMYYKMLISWTSQKVKDSYA 1034
            IPTFALGRAQELCILLDDYWERMNL  +PIYFSAGLT+QAN+YYK+LISWTSQKVK++YA
Sbjct: 236  IPTFALGRAQELCILLDDYWERMNLK-VPIYFSAGLTIQANLYYKILISWTSQKVKETYA 294

Query: 1033 TRNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFKQWAPSEINLITLPGYCV 854
            TRNAFDFKHV +F+RS++N  GPCVLFATPGMISGGFSLEVFKQWAP E+NLITLPGYCV
Sbjct: 295  TRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITLPGYCV 354

Query: 853  AGTIGHKLMSGKATKIQVDKETQVDVRCKIHQLSFSPHTDSKGIMDLVKFLSPKNVILVH 674
            AGT+GHKLMSGK TKI +DK+TQ+DVRC+IHQLSFSPHTDSKGIMDL KFLSP+NVILVH
Sbjct: 355  AGTVGHKLMSGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRNVILVH 414

Query: 673  GEKPKMAKLKGKIESELGIKCYDPANNDVVHITSPHYVKIDATKAFIENCINPNVKSFDS 494
            GEKPKM  LK +I++EL I CY PAN D VHI S  YVK  A+  FI +C+NPN +    
Sbjct: 415  GEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRFLKR 474

Query: 493  KVEGTSDLSSKGTGSSPVKETYDKRVAEGILVMDKTKRPKAAHQDELLSVLQVKR 329
              E  SD   + T  +   +  D+RVAEGIL+M+K K+ +  HQD+LL +L+ K+
Sbjct: 475  SKEDNSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKK 529


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  608 bits (1568), Expect = e-171
 Identities = 296/415 (71%), Positives = 357/415 (86%)
 Frame = -2

Query: 1573 EEQFSSQNIVDCLKKVTAVDLRQTVKVDDELEIRGYYAGHVIGAAMFYAKVKDSALVYTG 1394
            EEQF++ +I  CL KV AVDL+QTV+VD +L+IR YYAGHV+GAAMFYAKV DSA+VYTG
Sbjct: 117  EEQFTADHIKQCLNKVIAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTG 176

Query: 1393 DYNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYAREREFLKVVHQCVGNGGKVL 1214
            DYNMTPDRHLGAA ID+ L LDL+I+ESTYATT+R+SKYAREREFLKVVH+CV  GGKVL
Sbjct: 177  DYNMTPDRHLGAAQIDR-LQLDLLITESTYATTIRDSKYAREREFLKVVHKCVAGGGKVL 235

Query: 1213 IPTFALGRAQELCILLDDYWERMNLNSIPIYFSAGLTLQANMYYKMLISWTSQKVKDSYA 1034
            IPTFALGRAQELC+LLDDYWERMNL  +PIYFSAGLT+QANMYYKMLI WTSQK+K++Y 
Sbjct: 236  IPTFALGRAQELCLLLDDYWERMNLK-VPIYFSAGLTIQANMYYKMLIGWTSQKIKETYT 294

Query: 1033 TRNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFKQWAPSEINLITLPGYCV 854
            +RNAFDFK+V +F+RS+L+  GPCVLFATPGMISGGFSLEVFK+WAP E+NL+TLPGYCV
Sbjct: 295  SRNAFDFKNVYTFDRSLLDAPGPCVLFATPGMISGGFSLEVFKRWAPCEMNLVTLPGYCV 354

Query: 853  AGTIGHKLMSGKATKIQVDKETQVDVRCKIHQLSFSPHTDSKGIMDLVKFLSPKNVILVH 674
            AGTIGHKLMSGK +KI +DK+TQ+DVRC+IHQLSFSPHTD+KGIMDLVKFLSPK+VILVH
Sbjct: 355  AGTIGHKLMSGKPSKINLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVH 414

Query: 673  GEKPKMAKLKGKIESELGIKCYDPANNDVVHITSPHYVKIDATKAFIENCINPNVKSFDS 494
            GEKPKMA LK +I+SEL I+CY PAN + + I S  +VK DA++AFI +C++PN +  + 
Sbjct: 415  GEKPKMASLKERIQSELEIQCYVPANCETLCIPSTLFVKADASEAFIRSCLSPNFRFLNK 474

Query: 493  KVEGTSDLSSKGTGSSPVKETYDKRVAEGILVMDKTKRPKAAHQDELLSVLQVKR 329
             ++ TSDL    T ++   E  D+RVAEGILV++K K+ +  HQDELL +L  K+
Sbjct: 475  SLKDTSDLVLHSTNATSRLEVSDERVAEGILVVEKNKKARVVHQDELLLMLGAKQ 529


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  591 bits (1523), Expect = e-166
 Identities = 289/396 (72%), Positives = 345/396 (87%)
 Frame = -2

Query: 1528 VTAVDLRQTVKVDDELEIRGYYAGHVIGAAMFYAKVKDSALVYTGDYNMTPDRHLGAASI 1349
            V AVDL+QTV+VD +L+IR YYAGHV+GAAMFYAKV D+A+VYTGDYNMTPDRHLGAA I
Sbjct: 187  VIAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQI 246

Query: 1348 DKFLHLDLVISESTYATTVRESKYAREREFLKVVHQCVGNGGKVLIPTFALGRAQELCIL 1169
            D+ L LDL+I+ESTYATTVR+SKYAREREFLK VH+CV +GGKVLIPTFALGRAQELCIL
Sbjct: 247  DR-LQLDLLITESTYATTVRDSKYAREREFLKAVHKCVADGGKVLIPTFALGRAQELCIL 305

Query: 1168 LDDYWERMNLNSIPIYFSAGLTLQANMYYKMLISWTSQKVKDSYATRNAFDFKHVCSFER 989
            LD+YWERMNL  +PIYFSAGLT+QANMYYKMLISWT+Q+VK++YAT NAFDFK+V SF+R
Sbjct: 306  LDNYWERMNLK-VPIYFSAGLTIQANMYYKMLISWTNQRVKETYATHNAFDFKNVRSFDR 364

Query: 988  SMLNDRGPCVLFATPGMISGGFSLEVFKQWAPSEINLITLPGYCVAGTIGHKLMSGKATK 809
            S++N  GPCVLFATPGMISGGFSLEVFK WAPSE+NL+TLPGYC+AGTIGHKL +GK TK
Sbjct: 365  SLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGKPTK 424

Query: 808  IQVDKETQVDVRCKIHQLSFSPHTDSKGIMDLVKFLSPKNVILVHGEKPKMAKLKGKIES 629
            I +DK+ Q+ VRC+IHQLSFSPHTD+KGIMDLVKFLSPK+VILVHGEKPKMA LKGKIES
Sbjct: 425  IDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKIES 484

Query: 628  ELGIKCYDPANNDVVHITSPHYVKIDATKAFIENCINPNVKSFDSKVEGTSDLSSKGTGS 449
            +LGI+CY PANND V I S  ++K D +K FI + +NPN K   +  E  S+L SK T +
Sbjct: 485  DLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVKTISEDKSNLVSKETEA 544

Query: 448  SPVKETYDKRVAEGILVMDKTKRPKAAHQDELLSVL 341
            + V + +D+RVAEGIL+++K+K+ K  HQ+ELL ++
Sbjct: 545  TSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMI 580


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  590 bits (1521), Expect = e-166
 Identities = 289/399 (72%), Positives = 345/399 (86%)
 Frame = -2

Query: 1537 LKKVTAVDLRQTVKVDDELEIRGYYAGHVIGAAMFYAKVKDSALVYTGDYNMTPDRHLGA 1358
            L    AVDL+QTV+VD +L+IR YYAGHV+GAAMFYAKV D+A+VYTGDYNMTPDRHLGA
Sbjct: 1378 LPNFIAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGA 1437

Query: 1357 ASIDKFLHLDLVISESTYATTVRESKYAREREFLKVVHQCVGNGGKVLIPTFALGRAQEL 1178
            A ID+ L LDL+I+ESTYATTVR+SKYAREREFLK VH+CV +GGKVLIPTFALGRAQEL
Sbjct: 1438 AQIDR-LQLDLLITESTYATTVRDSKYAREREFLKAVHKCVADGGKVLIPTFALGRAQEL 1496

Query: 1177 CILLDDYWERMNLNSIPIYFSAGLTLQANMYYKMLISWTSQKVKDSYATRNAFDFKHVCS 998
            CILLD+YWERMNL  +PIYFSAGLT+QANMYYKMLISWT+Q+VK++YAT NAFDFK+V S
Sbjct: 1497 CILLDNYWERMNLK-VPIYFSAGLTIQANMYYKMLISWTNQRVKETYATHNAFDFKNVRS 1555

Query: 997  FERSMLNDRGPCVLFATPGMISGGFSLEVFKQWAPSEINLITLPGYCVAGTIGHKLMSGK 818
            F+RS++N  GPCVLFATPGMISGGFSLEVFK WAPSE+NL+TLPGYC+AGTIGHKL +GK
Sbjct: 1556 FDRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGK 1615

Query: 817  ATKIQVDKETQVDVRCKIHQLSFSPHTDSKGIMDLVKFLSPKNVILVHGEKPKMAKLKGK 638
             TKI +DK+ Q+ VRC+IHQLSFSPHTD+KGIMDLVKFLSPK+VILVHGEKPKMA LKGK
Sbjct: 1616 PTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKGK 1675

Query: 637  IESELGIKCYDPANNDVVHITSPHYVKIDATKAFIENCINPNVKSFDSKVEGTSDLSSKG 458
            IES+LGI+CY PANND V I S  ++K D +K FI + +NPN K   +  E  S+L SK 
Sbjct: 1676 IESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVKTISEDKSNLVSKE 1735

Query: 457  TGSSPVKETYDKRVAEGILVMDKTKRPKAAHQDELLSVL 341
            T ++ V + +D+RVAEGIL+++K+K+ K  HQ+ELL ++
Sbjct: 1736 TEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMI 1774


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Cucumis sativus]
          Length = 649

 Score =  586 bits (1511), Expect = e-165
 Identities = 291/415 (70%), Positives = 347/415 (83%), Gaps = 5/415 (1%)
 Frame = -2

Query: 1570 EQFSSQNIVDCLKKVTAVDLRQTVKVDDELEIRGYYAGHVIGAAMFYAKVKDSALVYTGD 1391
            EQF++ +I++CLKKV  VDL+QT++VD++L+IR YYAGHV+GAAMFYAKV D+A+VYTGD
Sbjct: 118  EQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGD 177

Query: 1390 YNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYAREREFLKVVHQCVGNGGKVLI 1211
            YNMTPDRHLGAA ID+ + LDL+I+ESTYATT+R+SKYAREREFLK VH C+ +GGKVLI
Sbjct: 178  YNMTPDRHLGAAQIDR-MQLDLLITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLI 236

Query: 1210 PTFALGRAQELCILLDDYWERMNLNSIPIYFSAGLTLQANMYYKMLISWTSQKVKDSYAT 1031
            PTFALGRAQELC+LLDDYWERMNL   PIY SAGLT+QANMYYKMLISWTSQKVK++Y T
Sbjct: 237  PTFALGRAQELCVLLDDYWERMNLK-FPIYVSAGLTVQANMYYKMLISWTSQKVKETYTT 295

Query: 1030 RNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFKQWAPSEINLITLPGYCVA 851
            RNAFDFK+V  F+RSM++  GPCVLFATPGMIS GFSLEVFK+WAPS++NLITLPGYCVA
Sbjct: 296  RNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVA 355

Query: 850  GTIGHKLMSGKATKIQVDKETQVDVRCKIHQLSFSPHTDSKGIMDLVKFLSPKNVILVHG 671
            GT+GHKLMSGK TKI +DK TQ+DV+C++HQL+FSPHTDSKGIMDLVKFLSPK+VILVHG
Sbjct: 356  GTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHG 415

Query: 670  EKPKMAKLKGKIESELGIKCYDPANNDVVHITSPHYVKIDATKAFIENCINPNVKSFDSK 491
            EKPKMA LK +I SELGI C+DPANN+ V I+S   VK +A+  FI++C  PN K     
Sbjct: 416  EKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRN 475

Query: 490  V--EGTSDLSSKGTGSSPV---KETYDKRVAEGILVMDKTKRPKAAHQDELLSVL 341
            +      DLS K   +S +    +  D RV EGILVM+  K+ KA HQDELL +L
Sbjct: 476  LIDPDLKDLSYKAERTSNMLIPLQVSDDRVNEGILVMENGKKTKALHQDELLLLL 530