BLASTX nr result

ID: Coptis23_contig00023332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023332
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280832.1| PREDICTED: uncharacterized protein LOC100247...   197   2e-48
emb|CAN81983.1| hypothetical protein VITISV_042631 [Vitis vinifera]   196   5e-48
ref|XP_002512375.1| glycogenin, putative [Ricinus communis] gi|2...   193   2e-47
ref|XP_003626298.1| Glycogenin-1 [Medicago truncatula] gi|355501...   193   3e-47
ref|XP_003553728.1| PREDICTED: uncharacterized protein LOC100809...   180   3e-43

>ref|XP_002280832.1| PREDICTED: uncharacterized protein LOC100247620 [Vitis vinifera]
           gi|296088322|emb|CBI36767.3| unnamed protein product
           [Vitis vinifera]
          Length = 546

 Score =  197 bits (500), Expect = 2e-48
 Identities = 98/173 (56%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
 Frame = +1

Query: 103 GREISIGFVNMHAQEVEEWKVLGTTTMVHFDPVQNVRHWEDYFPEWIDEDEKWDAPKCPN 282
           GR + IG VN+  Q+  E   L     V FD V     W D FPEWIDED+KW AP+CP+
Sbjct: 58  GRRVKIGLVNVGDQDFGELYGLRDQVHVPFDRVAGDVKWGDLFPEWIDEDQKWAAPRCPD 117

Query: 283 IPMPRYENYDQFDVVMVNVPCGNEV--KGEGIRDVFRLQVNLVVANLIENNGKKYGD-DQ 453
           IPMPR E Y+  DVV+  VPCG+ V    +G+RDVFR+QVNLVVANL   +G   GD DQ
Sbjct: 118 IPMPRLELYEDLDVVVARVPCGHGVVEGRKGVRDVFRVQVNLVVANLAVKSGLTRGDIDQ 177

Query: 454 DLFVVFIGSCGPMWEIFRCDDLLRHEGEFWIYKPDLRRLKQKGQMTVGTCQLA 612
            + VVF+GSCGPM EIFRCDDL+ H  ++W+Y+PDLR+LK K  M VG+CQLA
Sbjct: 178 TVIVVFVGSCGPMREIFRCDDLVEHGEDYWVYRPDLRKLKHKLVMPVGSCQLA 230


>emb|CAN81983.1| hypothetical protein VITISV_042631 [Vitis vinifera]
          Length = 546

 Score =  196 bits (497), Expect = 5e-48
 Identities = 98/173 (56%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
 Frame = +1

Query: 103 GREISIGFVNMHAQEVEEWKVLGTTTMVHFDPVQNVRHWEDYFPEWIDEDEKWDAPKCPN 282
           GR + IG VN+  Q+  E   L     V FD V     W D FPEWIDED+KW AP+CP+
Sbjct: 58  GRRVKIGLVNVGDQDFGELYGLRDQVHVPFDRVAGDVKWGDLFPEWIDEDQKWAAPRCPD 117

Query: 283 IPMPRYENYDQFDVVMVNVPCGNEV--KGEGIRDVFRLQVNLVVANLIENNGKKYGD-DQ 453
           IPMPR E Y   DVV+  VPCG+ V    +G+RDVFR+QVNLVVANL   +G   GD DQ
Sbjct: 118 IPMPRLELYKDLDVVVARVPCGDGVVEGRKGVRDVFRVQVNLVVANLAVKSGLTRGDIDQ 177

Query: 454 DLFVVFIGSCGPMWEIFRCDDLLRHEGEFWIYKPDLRRLKQKGQMTVGTCQLA 612
            + VVF+GSCGPM EIFRCDDL+ H  ++W+Y+PDLR+LK K  M VG+CQLA
Sbjct: 178 TVIVVFVGSCGPMREIFRCDDLVEHGEDYWVYRPDLRKLKHKLVMPVGSCQLA 230


>ref|XP_002512375.1| glycogenin, putative [Ricinus communis] gi|223548336|gb|EEF49827.1|
           glycogenin, putative [Ricinus communis]
          Length = 452

 Score =  193 bits (491), Expect = 2e-47
 Identities = 95/181 (52%), Positives = 122/181 (67%), Gaps = 4/181 (2%)
 Frame = +1

Query: 106 REISIGFVNMHAQEVEEWKVLGTTTMVH--FDPVQNVRHWEDYFPEWIDEDEKWDAPKCP 279
           + I IG VN+       +   G    VH  F+P+   R WED+FPEWIDEDEKW  P+CP
Sbjct: 59  KRIKIGLVNVDDDIRSLYDTYGLVETVHVDFEPIPEDRKWEDFFPEWIDEDEKWGPPRCP 118

Query: 280 NIPMPRYENYDQFDVVMVNVPCGNEVKG-EGIRDVFRLQVNLVVANLIENNGKKYGD-DQ 453
            IPMPR +NY   DVV+   PC     G +GIRD+ R+QVNLVVANL+  NG    D D+
Sbjct: 119 EIPMPRLKNYRGLDVVVARAPCVGTGGGRKGIRDIRRMQVNLVVANLVVANGWVKPDIDR 178

Query: 454 DLFVVFIGSCGPMWEIFRCDDLLRHEGEFWIYKPDLRRLKQKGQMTVGTCQLAVAQQKQG 633
            ++VVF+GSCGPM EIFRC+DLL H G++W+YKPDL++LKQK  M VG+CQ+A    + G
Sbjct: 179 TVYVVFMGSCGPMQEIFRCEDLLSHIGDYWVYKPDLKKLKQKLLMPVGSCQIAPPYAQTG 238

Query: 634 E 636
           +
Sbjct: 239 D 239


>ref|XP_003626298.1| Glycogenin-1 [Medicago truncatula] gi|355501313|gb|AES82516.1|
           Glycogenin-1 [Medicago truncatula]
          Length = 561

 Score =  193 bits (490), Expect = 3e-47
 Identities = 96/185 (51%), Positives = 127/185 (68%), Gaps = 9/185 (4%)
 Frame = +1

Query: 109 EISIGFVNMHAQEVEEWKVLGTTTMV-----HFDPVQNVRHWEDYFPEWIDEDEKWDAPK 273
           +I IG V+++ + + E ++ G  + V     HFD V     W D+FPEWIDE+ K D PK
Sbjct: 66  KIKIGLVDINPRSIGE-QLDGNRSRVDIVPIHFDRVSENLKWSDFFPEWIDEEGKPDEPK 124

Query: 274 CPNIPMPRYENYDQFDVVMVNVPCGNE-VKGEGIRDVFRLQVNLVVANLIENNG---KKY 441
           CPN+PMP   NY   DVVM  VPC  E ++ +GIRD+FRLQVNLVVANL+  N    K  
Sbjct: 125 CPNMPMPSLANYKDLDVVMAMVPCREESMEEKGIRDLFRLQVNLVVANLVVENKWKEKSE 184

Query: 442 GDDQDLFVVFIGSCGPMWEIFRCDDLLRHEGEFWIYKPDLRRLKQKGQMTVGTCQLAVAQ 621
            + +D+++VF+GSCGPM EIFRCDDLL H+GE+W+YKPDL RLKQK  M VG+CQ++   
Sbjct: 185 SNGKDMYIVFVGSCGPMVEIFRCDDLLMHQGEYWVYKPDLNRLKQKTLMPVGSCQISPGY 244

Query: 622 QKQGE 636
            + G+
Sbjct: 245 AESGK 249


>ref|XP_003553728.1| PREDICTED: uncharacterized protein LOC100809680 [Glycine max]
          Length = 539

 Score =  180 bits (456), Expect = 3e-43
 Identities = 92/179 (51%), Positives = 116/179 (64%), Gaps = 10/179 (5%)
 Frame = +1

Query: 106 REISIGFVNMHAQE----VEEWKVLGT---TTMVHFDPVQNVRHWEDYFPEWIDEDEKWD 264
           ++I +G VN+ A+      E+   L +   T  + FD V     WED FPEWIDE+ KW 
Sbjct: 46  KKIKVGLVNIDARVDGSIFEQLDTLDSQVDTISIDFDHVDKNLKWEDIFPEWIDENGKWG 105

Query: 265 APKCPNIPMPRYENYDQFDVVMVNVPCGNEVKGEGIRDVFRLQVNLVVANLIENNG---K 435
            PKCPN+PMP  +NY   +VV+  VPCG       IRDVFRLQVNLVVANL   +G   K
Sbjct: 106 QPKCPNLPMPALQNYGDLNVVVAKVPCG-------IRDVFRLQVNLVVANLAVESGWVTK 158

Query: 436 KYGDDQDLFVVFIGSCGPMWEIFRCDDLLRHEGEFWIYKPDLRRLKQKGQMTVGTCQLA 612
              D + + VVF+GSCGPM EIFRCDDLL H  E+W+Y+PDLRRLK +  M +G+CQ+A
Sbjct: 159 MESDHRKVHVVFVGSCGPMVEIFRCDDLLMHRPEYWVYRPDLRRLKHQTLMPLGSCQIA 217


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