BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023322
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    95   3e-17
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               85   2e-14
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    73   1e-10
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-10
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    66   1e-08

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 97/312 (31%), Positives = 145/312 (46%), Gaps = 11/312 (3%)
 Frame = +2

Query: 17   LKLPDLVSLPVLKTLHLKSFNFTDD--VNKLFSSCPLLESLSLTDIKFYKMPNLNIFGPK 190
            L +P  V LP LK LHLKS  ++DD  + KL S CP+LE L +   +      +N+  P 
Sbjct: 154  LDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPS 213

Query: 191  LKHLAVENCSEVEFYDFTSHQYRSSKIDCKIEVVAPILSSLRLKAHLSSDYSIEILPSLV 370
            LK L +       F D  +H Y     D K+ V AP L  L +  +LS DY ++ LPSLV
Sbjct: 214  LKILRI-----FFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLV 268

Query: 371  IADIDMEVDIDWEAEEIQAKRMENYVQSSERYLRKVCNVRNLTLSPWFLELLCKPAARIE 550
             A ID+E D + E EE       +Y       L ++ NV+ L+L+   L+ L       +
Sbjct: 269  KAFIDVEQDSE-EFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYK 327

Query: 551  NPALQFLSLRYMKLQTWLSGNCFHAITYXXXXXXXXXXXXVEVLEREVSAQYSNEGYQDT 730
             P    ++    +L+    G       +            +E L  E    Y+NE   + 
Sbjct: 328  LPTFHNMT----RLEFLFIG----GFNWDFLPNFLHSSPNLEALVIETG--YTNELIPEG 377

Query: 731  GL-ALQ----CMYHLRSVEIQGIIGCTNGLKFLENLLKNALVLEKMVFFASKDL--EEF- 886
             L  LQ     + HL+ +EI+ I+G    L+ +E LLKNA VL++M     +    +EF 
Sbjct: 378  WLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFC 437

Query: 887  -KEKLMHIPLAS 919
              +KL+ +P  S
Sbjct: 438  VCKKLLGLPRGS 449


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
 Frame = +2

Query: 17  LKLPDLVSLPVLKTLHLKSFNFTDD--VNKLFSSCPLLESLSLTDIKFYKMPNLNIFGPK 190
           L +P  V LP LK LHLKS  ++DD  + KL S CP+LE L +   +      +N+  P 
Sbjct: 131 LDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPS 190

Query: 191 LKHLAVENCSEVEFYDFTSHQYRSSKIDCKIEVVAPILSSLRLKAHLSSDYSIEILPSLV 370
           LK L +       F D  +H Y     D K+ V AP L  L +  +LS DY ++ LPSLV
Sbjct: 191 LKILRI-----FFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLV 245

Query: 371 IADIDMEVDIDWEAEEIQAKRMENYVQSSERYLRKVCNVRNLTLSPWFLEL--LCKP 535
            A ID+E D + E EE       +Y       L ++ NV+ L+L+   L++  LC P
Sbjct: 246 KAFIDVEQDSE-EFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDVSFLCPP 301


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
 Frame = +2

Query: 17  LKLPDLVSLPVLKTLHLKSFNFTDDVNKLFSSCPLLESLSLTDIKFYKMPNLNIFGPKLK 196
           L LP  + L  LKTLHL      D   K+FSSCP LE+L++ DI    + N NI    LK
Sbjct: 181 LALPKSLGLQSLKTLHLGGAQNFD--GKIFSSCPNLENLTIEDICLNVIENFNIHALSLK 238

Query: 197 HLAVENCSEVEFYDFTSHQYRSSKIDCKIEVVAPILSSLRLKAHLSSDYSIEILPSLVIA 376
            L + N            +Y   K  CK+ +VAP L+S +   +    +S   L SL   
Sbjct: 239 SLEILN-----------WRYNRIKQGCKVMLVAPKLTSFKFDGNTPLFWSDVNLTSLDDV 287

Query: 377 DIDME------------VDIDWEAEEIQAKRMENYVQSSERYLRKVCNVRNLTLSPWFLE 520
           ++ ++            V+ ++ +EE + +  +    +  + L + C+ ++LTLS   +E
Sbjct: 288 NVVLQRYHHSHNYPFYVVEDEYISEEDETE--QGLGLNLIKMLHQFCSAKSLTLSMNIIE 345

Query: 521 LLCKPAARIENPALQFLSLRYMKLQT 598
           +L +  A ++     F +L+Y+KL+T
Sbjct: 346 ILSEVPAALDKHPSPFSNLKYLKLKT 371


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
 Frame = +2

Query: 17  LKLPDLVSLPVLKTLHLKSFNFTDDVNKLFSSCPLLESLSLTDIKFYKMPNLNIFGPKLK 196
           + LP  + LP LKTLHL      D   K+FSSCP LE+L++ DI    + N NI    LK
Sbjct: 162 IALPKSLGLPSLKTLHLGGAQNFD--GKIFSSCPNLENLTIEDICLNTIENFNIHALNLK 219

Query: 197 HLAVENCSEVEFYDFTSHQYRSSKI--DCKIEVVAPILSSLRLKAHLSSDYSIEILPSLV 370
            L + N             +R S+I   CK+ + AP L+S +   +    +S   L SL 
Sbjct: 220 SLEILN-------------WRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLD 266

Query: 371 IADI---------DMEVDIDWEAEEI--QAKRMENYVQSSERYLRKVCNVRNLTLSPWFL 517
             ++         D +  +D E E I  + +  + +     + L + C+ ++LTLS   +
Sbjct: 267 DVNVVLQRYYYRHDYQFYVD-EDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNII 325

Query: 518 ELLCKPAARIENPALQFLSLRYMKLQT 598
           E+L K  A +      F +L+Y+KL+T
Sbjct: 326 EVLSKVPAALNKHPSPFSNLKYLKLKT 352


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
           gi|222873902|gb|EEF11033.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
 Frame = +2

Query: 17  LKLPDLVSLPVLKTLHLKSFNFTDDVNKLFSSCPLLESLSLTDIKFYKMPNLNIFGPKLK 196
           + LP  + L  LKTLHL      D   K+FS+CP LE+L + DI    + N NI    LK
Sbjct: 181 IALPKSLGLQSLKTLHLGGARNFD--GKIFSTCPNLENLKIEDIYLNTIENFNIHALNLK 238

Query: 197 HLAVENCSEVEFYDFTSHQYRSSKIDCKIEVVAPILSSLRLKAHLSSDYSIEILPSLVIA 376
            L + N            +Y      CK+ + AP L+S +   +    +S   L SL   
Sbjct: 239 SLEILN-----------WRYGRIMRGCKVMLFAPKLTSFKFYGNTPLFWSEVNLTSLDDV 287

Query: 377 DIDME------------VDIDWEAEEIQAKRMENYVQSSERYLRKVCNVRNLTLSPWFLE 520
           ++ ++            V+ ++ +EE + +  +    +  + L + C+ ++LTLS   +E
Sbjct: 288 NVVLQRYQHSHNYPFYVVEDEYISEEDETE--QGLGLNLIKMLHQFCSAKSLTLSMNIIE 345

Query: 521 LLCKPAARIENPALQFLSLRYMKLQT 598
           +L +  A ++     F +L+Y+KL+T
Sbjct: 346 ILSEVPAALDKHPSPFSNLKYLKLKT 371