BLASTX nr result

ID: Coptis23_contig00023304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023304
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264196.1| PREDICTED: uncharacterized protein C23H3.12c...   329   4e-88
ref|XP_002326436.1| predicted protein [Populus trichocarpa] gi|2...   328   1e-87
ref|XP_002533326.1| conserved hypothetical protein [Ricinus comm...   325   1e-86
ref|NP_001242857.1| uncharacterized protein LOC100779253 [Glycin...   313   3e-83
ref|NP_175779.1| uncharacterized protein [Arabidopsis thaliana] ...   307   2e-81

>ref|XP_002264196.1| PREDICTED: uncharacterized protein C23H3.12c [Vitis vinifera]
           gi|297742919|emb|CBI35786.3| unnamed protein product
           [Vitis vinifera]
          Length = 266

 Score =  329 bits (844), Expect = 4e-88
 Identities = 159/276 (57%), Positives = 216/276 (78%)
 Frame = +3

Query: 39  MRARLVVFPIKQRNWCFSRSLDKSTTTTTGEPSHSPTTLKDLWNKLLSNNDHKPISQNAQ 218
           M+ARLVVFPIK R WCF+RS+D +   +  + +H+P+TL+DLWN++ SN   KP++ NA+
Sbjct: 1   MKARLVVFPIKGRKWCFARSVDPAAADS--QAAHTPSTLRDLWNRISSNP--KPLNANAE 56

Query: 219 LLVDFIANKMNRAWTGLQNAPQGTFKSKLHGVGLLLLARVKPSEIFLRSISKDVNKLQIT 398
           LL+DF +NKMN+AW GL+ AP+GT K+KL+G+GL LLARVKPSEIFL+SISK+V+K+ + 
Sbjct: 57  LLLDFASNKMNKAWVGLEKAPEGTLKNKLYGLGLRLLARVKPSEIFLKSISKEVSKVHVA 116

Query: 399 YPTSIDPRLVRRRLRHIAMRGTVIHRRYFYGSVTLLPFTSALAILPLPNIPFFWMLFRTY 578
           YP+S++ RLVRRRLRH+A+RG  IH++YFYGSV+LLPFT A ++LPLPNIPFFW+ FRTY
Sbjct: 117 YPSSLNARLVRRRLRHVALRGNFIHKKYFYGSVSLLPFTFAFSVLPLPNIPFFWISFRTY 176

Query: 579 SHWRALKGSERLLLLVSNCPEEWNSVSNTSGDGKGASHDDLKIEHHKSPDRPWVLQPSEE 758
           SHW+AL+GSERLL LVS+C E   S      D    S D++    HKS   PWVL+PSEE
Sbjct: 177 SHWQALQGSERLLRLVSDCIETQKS------DASNKSKDEI----HKSLGCPWVLEPSEE 226

Query: 759 LDRYLHMLHEENGLSKSVLSDICKAYQLDTNDVLKY 866
           L++ L +    +G++K+ +SDICK + L+ ND+LK+
Sbjct: 227 LEKLLCIGDANDGVNKNAVSDICKTFHLNKNDILKF 262


>ref|XP_002326436.1| predicted protein [Populus trichocarpa] gi|222833758|gb|EEE72235.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  328 bits (841), Expect = 1e-87
 Identities = 160/277 (57%), Positives = 213/277 (76%)
 Frame = +3

Query: 39  MRARLVVFPIKQRNWCFSRSLDKSTTTTTGEPSHSPTTLKDLWNKLLSNNDHKPISQNAQ 218
           MRARLVVFP+K RNWCFSRS+D S        SH+P+TLK LW K+ S+++    ++N +
Sbjct: 1   MRARLVVFPVKGRNWCFSRSIDPSLEEAAA--SHTPSTLKHLWKKISSSSNSS--AKNVE 56

Query: 219 LLVDFIANKMNRAWTGLQNAPQGTFKSKLHGVGLLLLARVKPSEIFLRSISKDVNKLQIT 398
           L++D+ +NKM++AW GL+ AP+GTFK+KLHG+GL LL+RVKPSEIFL+SISK+V+ ++IT
Sbjct: 57  LVIDYASNKMDKAWMGLEKAPEGTFKNKLHGLGLKLLSRVKPSEIFLKSISKEVSSVEIT 116

Query: 399 YPTSIDPRLVRRRLRHIAMRGTVIHRRYFYGSVTLLPFTSALAILPLPNIPFFWMLFRTY 578
           YP+S++ RLVRRRLRHIAMRG  IH++YFYGSV LLP +SALA+LPLPNIPFFW LFR+Y
Sbjct: 117 YPSSLNARLVRRRLRHIAMRGAAIHKKYFYGSVMLLPLSSALAVLPLPNIPFFWFLFRSY 176

Query: 579 SHWRALKGSERLLLLVSNCPEEWNSVSNTSGDGKGASHDDLKIEHHKSPDRPWVLQPSEE 758
           S+WRALKGSE+LL LVS+C    NS +  +  G     ++ + + H S D  WVLQPS+E
Sbjct: 177 SNWRALKGSEKLLQLVSDCSCAENSAA-PNAKGSEPESEEPRHKSHSSQDSLWVLQPSKE 235

Query: 759 LDRYLHMLHEENGLSKSVLSDICKAYQLDTNDVLKYK 869
           L   L+   +ENGL+ S +SDICK + L+  DV K++
Sbjct: 236 LQELLNKHADENGLNDSAISDICKTFSLNVKDVSKFR 272


>ref|XP_002533326.1| conserved hypothetical protein [Ricinus communis]
           gi|223526848|gb|EEF29062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  325 bits (832), Expect = 1e-86
 Identities = 157/279 (56%), Positives = 213/279 (76%), Gaps = 1/279 (0%)
 Frame = +3

Query: 39  MRARLVVFPIKQRNWCFSRSLDKSTTTTTGEPSHSPTTLKDLWNKLLSNNDHKPISQNAQ 218
           MRARLVVFP+K RNWCFSRS++ S        +++P TLK+LW  + S+N +   + NA+
Sbjct: 1   MRARLVVFPVKGRNWCFSRSIEPSVAEAAS--AYAPNTLKELWKNISSSNSN---AHNAE 55

Query: 219 LLVDFIANKMNRAWTGLQNAPQGTFKSKLHGVGLLLLARVKPSEIFLRSISKDVNKLQIT 398
           L++DF++NKMNRAW GL+ AP+GT K+KLHG+GL LL+RVKPSEIFL+SISK+V  ++I 
Sbjct: 56  LVIDFVSNKMNRAWVGLEKAPEGTLKNKLHGLGLKLLSRVKPSEIFLKSISKEVTDVEII 115

Query: 399 YPTSIDPRLVRRRLRHIAMRGTVIHRRYFYGSVTLLPFTSALAILPLPNIPFFWMLFRTY 578
           YP+S++PRLVRRRLRH+A+ G+ IH++YFY SV+LLP TSA  +LPLPNIPFFW+LFR Y
Sbjct: 116 YPSSLNPRLVRRRLRHVALSGSAIHKKYFYSSVSLLPLTSAFMVLPLPNIPFFWVLFRAY 175

Query: 579 SHWRALKGSERLLLLVSNCPEEWN-SVSNTSGDGKGASHDDLKIEHHKSPDRPWVLQPSE 755
           SHWRAL+GSE+LL LVS+ P   N  + N         H + +I+  K  + PWVLQPS+
Sbjct: 176 SHWRALQGSEKLLELVSDSPHADNLDIRNRQTSETENGHSEHEIQ--KPQNFPWVLQPSK 233

Query: 756 ELDRYLHMLHEENGLSKSVLSDICKAYQLDTNDVLKYKK 872
           +L++ L+   E NGLSK  +S+ICK + L+TNDVL++K+
Sbjct: 234 DLEKLLNYGDENNGLSKCGISNICKTFHLNTNDVLRFKR 272


>ref|NP_001242857.1| uncharacterized protein LOC100779253 [Glycine max]
           gi|255639875|gb|ACU20230.1| unknown [Glycine max]
          Length = 274

 Score =  313 bits (803), Expect = 3e-83
 Identities = 153/278 (55%), Positives = 205/278 (73%)
 Frame = +3

Query: 39  MRARLVVFPIKQRNWCFSRSLDKSTTTTTGEPSHSPTTLKDLWNKLLSNNDHKPISQNAQ 218
           MRA+L VFPI+ RNWCFSR++D S + +    S SP+TLKDLW  +  N   KP++   +
Sbjct: 1   MRAKLFVFPIRGRNWCFSRTIDHSLSASHAS-SQSPSTLKDLWTNI--NVGDKPLNTKTE 57

Query: 219 LLVDFIANKMNRAWTGLQNAPQGTFKSKLHGVGLLLLARVKPSEIFLRSISKDVNKLQIT 398
           L VD+IANKMN AW GL+ AP+G+FK+K+HG+GL LL+RVKPSEIFL+SISK++  ++I 
Sbjct: 58  LFVDYIANKMNNAWIGLEKAPEGSFKNKIHGLGLRLLSRVKPSEIFLKSISKEITSVEII 117

Query: 399 YPTSIDPRLVRRRLRHIAMRGTVIHRRYFYGSVTLLPFTSALAILPLPNIPFFWMLFRTY 578
           YP+S++ +LVRRRLRHIA+RG VIHR Y YG V+L+P TSAL+ILPLPN+PFFW+LFRTY
Sbjct: 118 YPSSLNAQLVRRRLRHIAVRGAVIHRNYLYGLVSLIPLTSALSILPLPNVPFFWVLFRTY 177

Query: 579 SHWRALKGSERLLLLVSNCPEEWNSVSNTSGDGKGASHDDLKIEHHKSPDRPWVLQPSEE 758
           SHWRAL+GSERL  LVS    + +  SNT    K   H + K + H S +  WVL+PS+E
Sbjct: 178 SHWRALQGSERLFQLVS----DNSKTSNTCTYEKKTEHKESKSQRHSSNEPCWVLRPSKE 233

Query: 759 LDRYLHMLHEENGLSKSVLSDICKAYQLDTNDVLKYKK 872
           L+  +H+   +   S+  + +ICK Y L+  DV+KY+K
Sbjct: 234 LENLVHLEDGQESFSQHAIINICKIYDLNPVDVIKYEK 271


>ref|NP_175779.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12324017|gb|AAG51966.1|AC024260_4 hypothetical
           protein; 1267-3026 [Arabidopsis thaliana]
           gi|62321744|dbj|BAD95368.1| hypothetical protein
           [Arabidopsis thaliana] gi|110739374|dbj|BAF01599.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110741179|dbj|BAF02140.1| hypothetical protein
           [Arabidopsis thaliana] gi|110741288|dbj|BAF02194.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332194872|gb|AEE32993.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 272

 Score =  307 bits (787), Expect = 2e-81
 Identities = 158/277 (57%), Positives = 201/277 (72%)
 Frame = +3

Query: 39  MRARLVVFPIKQRNWCFSRSLDKSTTTTTGEPSHSPTTLKDLWNKLLSNNDHKPISQNAQ 218
           MRARLVVFPIK + WCFSRS+D     +      +PTT++ LW K+ S +  KPI+ NA+
Sbjct: 1   MRARLVVFPIKGKKWCFSRSVDPFAAQSPS--GVTPTTVRGLWKKISSES--KPINANAE 56

Query: 219 LLVDFIANKMNRAWTGLQNAPQGTFKSKLHGVGLLLLARVKPSEIFLRSISKDVNKLQIT 398
           LLVDFI++KMN+AW GL+ AP G+ K+K+HG GL LLARVKPSEIFL+SISK+V  +Q+T
Sbjct: 57  LLVDFISDKMNKAWVGLEKAPDGSIKNKIHGFGLKLLARVKPSEIFLKSISKEVTSVQVT 116

Query: 399 YPTSIDPRLVRRRLRHIAMRGTVIHRRYFYGSVTLLPFTSALAILPLPNIPFFWMLFRTY 578
           YP S+DPRLVRRRLRHIAM GT++H++Y  GSVTLLP TSA  +LPLPNIPFFW+LFRTY
Sbjct: 117 YPPSLDPRLVRRRLRHIAMSGTILHKKYLVGSVTLLPLTSAFMVLPLPNIPFFWVLFRTY 176

Query: 579 SHWRALKGSERLLLLVSNCPEEWNSVSNTSGDGKGASHDDLKIEHHKSPDRPWVLQPSEE 758
           SHWRAL+GSE+LL L+SN   E N     S D    S +       KS     +L PSEE
Sbjct: 177 SHWRALQGSEKLLKLISN---EANPDKPDSTDDADESKNSNTKPEQKSQSPTCILLPSEE 233

Query: 759 LDRYLHMLHEENGLSKSVLSDICKAYQLDTNDVLKYK 869
           L + +    EE GL ++ + +ICK++ L+ NDVLKY+
Sbjct: 234 LYQLIREASEE-GLDEATIIEICKSFDLNKNDVLKYR 269


Top