BLASTX nr result

ID: Coptis23_contig00023303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023303
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307902.1| predicted protein [Populus trichocarpa] gi|2...   167   9e-40
gb|ABK92842.1| unknown [Populus trichocarpa]                          167   9e-40
emb|CBI28425.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002321180.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_003549517.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   160   8e-38

>ref|XP_002307902.1| predicted protein [Populus trichocarpa] gi|222853878|gb|EEE91425.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  167 bits (423), Expect = 9e-40
 Identities = 68/101 (67%), Positives = 89/101 (88%)
 Frame = -2

Query: 402 VIIRKSDGQFEQWCIADEQTPKNILQQALDWACAQKDVDCSKIQVNQPCYLPSTVRDHAS 223
           ++++KS+GQFE+WCIADEQTP + LQ+A+DWAC +   DCSKIQ+NQPCY+P+T+RDHAS
Sbjct: 18  LMLQKSEGQFEEWCIADEQTPDDELQRAMDWACGKGGADCSKIQMNQPCYMPNTIRDHAS 77

Query: 222 YAFNDYYQKYKHKGASCYFNSAAMTTELDPSHDKCKMVFIP 100
           YAFNDYYQK+KHKGA+CYFN+AA+ T+LDPS   CK  ++P
Sbjct: 78  YAFNDYYQKFKHKGATCYFNAAALITDLDPSQHSCKFDYLP 118


>gb|ABK92842.1| unknown [Populus trichocarpa]
          Length = 119

 Score =  167 bits (423), Expect = 9e-40
 Identities = 68/101 (67%), Positives = 89/101 (88%)
 Frame = -2

Query: 402 VIIRKSDGQFEQWCIADEQTPKNILQQALDWACAQKDVDCSKIQVNQPCYLPSTVRDHAS 223
           ++++KS+GQFE+WCIADEQTP + LQ+A+DWAC +   DCSKIQ+NQPCY+P+T+RDHAS
Sbjct: 19  LMLQKSEGQFEEWCIADEQTPDDELQRAMDWACGKGGADCSKIQMNQPCYMPNTIRDHAS 78

Query: 222 YAFNDYYQKYKHKGASCYFNSAAMTTELDPSHDKCKMVFIP 100
           YAFNDYYQK+KHKGA+CYFN+AA+ T+LDPS   CK  ++P
Sbjct: 79  YAFNDYYQKFKHKGATCYFNAAALITDLDPSQHSCKFDYLP 119


>emb|CBI28425.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  163 bits (413), Expect = 1e-38
 Identities = 71/97 (73%), Positives = 81/97 (83%)
 Frame = -2

Query: 390 KSDGQFEQWCIADEQTPKNILQQALDWACAQKDVDCSKIQVNQPCYLPSTVRDHASYAFN 211
           KS G+FEQWCIADEQTP + LQ  +DWAC +   DCSKIQVN+PCYLP+TVRDHASYAFN
Sbjct: 21  KSAGEFEQWCIADEQTPDDELQAGIDWACGEGGADCSKIQVNKPCYLPNTVRDHASYAFN 80

Query: 210 DYYQKYKHKGASCYFNSAAMTTELDPSHDKCKMVFIP 100
           +YYQK+K+KG +CYFN AAM TELDPSHD C   FIP
Sbjct: 81  NYYQKFKNKGGTCYFNGAAMITELDPSHDSCHYDFIP 117


>ref|XP_002321180.1| predicted protein [Populus trichocarpa] gi|222861953|gb|EEE99495.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  163 bits (413), Expect = 1e-38
 Identities = 72/98 (73%), Positives = 81/98 (82%)
 Frame = -2

Query: 393 RKSDGQFEQWCIADEQTPKNILQQALDWACAQKDVDCSKIQVNQPCYLPSTVRDHASYAF 214
           RKSDG+ EQWCIADEQTP + LQ ALDWAC +   DCSKIQVNQPCYLP+TVRDHASYAF
Sbjct: 20  RKSDGELEQWCIADEQTPDDELQIALDWACGKGGADCSKIQVNQPCYLPNTVRDHASYAF 79

Query: 213 NDYYQKYKHKGASCYFNSAAMTTELDPSHDKCKMVFIP 100
           N+Y+QK+KHKG SCYF  AA+ TELDPSH  C+  F P
Sbjct: 80  NNYFQKFKHKGGSCYFKGAAIITELDPSHSSCQYEFHP 117


>ref|XP_003549517.1| PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Glycine max]
          Length = 116

 Score =  160 bits (406), Expect = 8e-38
 Identities = 67/94 (71%), Positives = 82/94 (87%)
 Frame = -2

Query: 381 GQFEQWCIADEQTPKNILQQALDWACAQKDVDCSKIQVNQPCYLPSTVRDHASYAFNDYY 202
           GQFE+WCIADEQTP   LQ+A++WAC +   DCSKIQVNQPCYLP+T++DHASYAFN+YY
Sbjct: 23  GQFEEWCIADEQTPDEELQRAMEWACGKGGADCSKIQVNQPCYLPNTLKDHASYAFNNYY 82

Query: 201 QKYKHKGASCYFNSAAMTTELDPSHDKCKMVFIP 100
           Q++K+KG SCYFNSAA+TT+LDPSH  CK  F+P
Sbjct: 83  QRFKNKGGSCYFNSAAITTDLDPSHGSCKYEFVP 116


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