BLASTX nr result

ID: Coptis23_contig00023302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023302
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001781100.1| predicted protein [Physcomitrella patens sub...   105   4e-21
gb|ABK25138.1| unknown [Picea sitchensis]                             103   2e-20
ref|XP_003546765.1| PREDICTED: coiled-coil domain-containing pro...   102   3e-20
gb|ACU23145.1| unknown [Glycine max]                                  102   3e-20
gb|ACU21483.1| unknown [Glycine max]                                  102   3e-20

>ref|XP_001781100.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162667497|gb|EDQ54126.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 263

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/49 (93%), Positives = 49/49 (100%)
 Frame = -2

Query: 149 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNY 3
           MGERKVLNKY+PPDFDPAK+PRR+QPKNQQIKVRMMLPMSIRCNTCGNY
Sbjct: 1   MGERKVLNKYYPPDFDPAKIPRRKQPKNQQIKVRMMLPMSIRCNTCGNY 49


>gb|ABK25138.1| unknown [Picea sitchensis]
          Length = 342

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNY 3
           MGERKVLNKY+PPDFDP+K+PRRRQPKNQQIKVRMMLPMSIRC TCGNY
Sbjct: 1   MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIRCGTCGNY 49


>ref|XP_003546765.1| PREDICTED: coiled-coil domain-containing protein 94 homolog
           [Glycine max]
          Length = 326

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNY 3
           MGERKVLNKY+PPDFDP+KLPR R+PKNQQIKVRMMLPMSIRCNTCGNY
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNY 49


>gb|ACU23145.1| unknown [Glycine max]
          Length = 252

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNY 3
           MGERKVLNKY+PPDFDP+KLPR R+PKNQQIKVRMMLPMSIRCNTCGNY
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNY 49


>gb|ACU21483.1| unknown [Glycine max]
          Length = 326

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNY 3
           MGERKVLNKY+PPDFDP+KLPR R+PKNQQIKVRMMLPMSIRCNTCGNY
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNY 49


Top