BLASTX nr result

ID: Coptis23_contig00023300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023300
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633332.1| PREDICTED: uncharacterized protein LOC100251...    85   3e-14
emb|CAN61076.1| hypothetical protein VITISV_012918 [Vitis vinifera]    80   8e-13
ref|XP_002320522.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_002300378.1| predicted protein [Populus trichocarpa] gi|1...    70   5e-10
ref|XP_002522757.1| conserved hypothetical protein [Ricinus comm...    58   3e-06

>ref|XP_003633332.1| PREDICTED: uncharacterized protein LOC100251126 [Vitis vinifera]
          Length = 262

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 83/240 (34%), Positives = 109/240 (45%), Gaps = 33/240 (13%)
 Frame = -3

Query: 664 WVHGAVVAL----FLIFAVSFTCLLTSILLYFLAIFAAFTKLKSGVKCENISSSLNTSVV 497
           WV   V  L    FL F V  + L+TS  L    +   F+K +  V+ E++         
Sbjct: 24  WVAALVPVLIFAGFLGFGV-LSILITSSALILSTVLFTFSKQRPVVEEESLKEEEEKVEE 82

Query: 496 EELGEQQK-----------PKEKEVTA------DKLSQQDDASK------IHDYISRSMD 386
           EE  E+++           P  +EV +      D + Q+D+A +      +++YI  S D
Sbjct: 83  EEEEEEEEEVLRSDHHESLPHMEEVASRTQTETDTIIQRDEAQESGMSHQMNEYIDESPD 142

Query: 385 LSSENESIDLSSTSEDSVGYWQSGSNMGGLLTCXXXXXXXXXSLIEIALPEGHYICPIDE 206
             S+ ES+D SSTS++S   W    N G    C         SLIEIAL  GHY+ P  E
Sbjct: 143 SLSKTESLDQSSTSDESEVEWPFPDNAGQSPECSDGSISDEDSLIEIALLSGHYVDPKQE 202

Query: 205 -TKFKWQ---PSF-PESIFQQ-XXXXXXXXXXXXXXXXXXXXEIDISMGSIKCSRLEIEA 44
             KF  Q   P F P+SIFQQ                     EIDISMGSIKCSR EIEA
Sbjct: 203 DPKFNSQKKLPDFTPDSIFQQHSTLMELLAEMNEMNEEENLIEIDISMGSIKCSRFEIEA 262


>emb|CAN61076.1| hypothetical protein VITISV_012918 [Vitis vinifera]
          Length = 459

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 79/231 (34%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
 Frame = -3

Query: 664 WVHGAVVAL----FLIFAVSFTCLLTSILLYFLAIFAAFTKLKSGVKCENISSSLNTSVV 497
           WV   V  L    FL F V  + L+TS  L    +   F+K +  V+ E++         
Sbjct: 14  WVAALVPVLIFAGFLGFGV-LSILITSSALILSTVLFTFSKQRPVVEEESLKEEEKVEEE 72

Query: 496 EELGE-------QQKPKEKEVTA------DKLSQQDDASK------IHDYISRSMDLSSE 374
           EE  E       +  P  +EV +      D ++Q+D+A +      +++YI  S D  S+
Sbjct: 73  EEEEEVLRSDHHESLPHMEEVASRTQTETDTITQRDEAQESGMSHQMNEYIDESPDSLSK 132

Query: 373 NESIDLSSTSEDSVGYWQSGSNMGGLLTCXXXXXXXXXSLIEIALPEGHYICPIDE-TKF 197
            ES+D SSTS++S   W    N G    C         SLIEIAL  GHY+ P  E  KF
Sbjct: 133 TESLDQSSTSDESEVEWPFPDNAGQSPECSDGSISDEDSLIEIALLSGHYVDPKQEDPKF 192

Query: 196 KWQ---PSF-PESIFQQ-XXXXXXXXXXXXXXXXXXXXEIDISMGSIKCSR 59
             Q   P F P+SIFQQ                     EIDISMGSIKCSR
Sbjct: 193 NSQKKLPDFTPDSIFQQHSTLMELLAEMNEMNEEENLIEIDISMGSIKCSR 243


>ref|XP_002320522.1| predicted protein [Populus trichocarpa] gi|222861295|gb|EEE98837.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
 Frame = -3

Query: 640 LFLIFAVSFTCLLTSILLYFLAIFAAFTKLKSGVKCENI--SSSLNTSVVEELGEQQKPK 467
           L  IF  S   +L+S++L F       T+++  V  E +    +  +  +E++  +    
Sbjct: 35  LLSIFLTSTALILSSLILTFSK--QKQTQVQKSVTDEIVMPDQASTSPYIEDVISKPLVL 92

Query: 466 EKEVTADKLSQQDDASK-----------IHDYISRSMD-LSSENESIDLSSTSEDSVGYW 323
           EKE   ++  ++++  +           + +Y+ RS   ++SE++ +  SSTSEDS   W
Sbjct: 93  EKEFITEEEEEEEEEEEGGGGGGGGRGQVDEYLVRSSQVITSESDCLGRSSTSEDSEVEW 152

Query: 322 QSGSNMGGLLTCXXXXXXXXXSLIEIALPEGHYICPIDETKFKWQ-----PSF-PESIFQ 161
                M     C         SLIEI+LP GHYIC  +E +  +      P F P S F+
Sbjct: 153 LFQDKMFQSRECSDGSISDEDSLIEISLPGGHYICDHEEDEVIYNLQNKLPDFAPGSFFK 212

Query: 160 QXXXXXXXXXXXXXXXXXXXXEIDISMGSIKCSRLEIEA 44
           Q                    EIDISMGSIKC R EIEA
Sbjct: 213 QHGLMELLAELNEMNEEENLIEIDISMGSIKCPRFEIEA 251


>ref|XP_002300378.1| predicted protein [Populus trichocarpa] gi|118484738|gb|ABK94238.1|
           unknown [Populus trichocarpa]
           gi|222847636|gb|EEE85183.1| predicted protein [Populus
           trichocarpa]
          Length = 235

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
 Frame = -3

Query: 661 VHGAVVALFLIFAVSFTCLLTSILLYFLAIF-AAFTKLKSGV-----KCENISSSLNTSV 500
           V   V   FL+F +S T L+T  +L+   IF   F+K K  V     + E+ +    + +
Sbjct: 26  VASLVFTCFLLFGIS-TYLITISVLFLSTIFIVTFSKKKVAVVSNSAEAESPTCRPQSML 84

Query: 499 VEELGEQQKPKEKEVTADKLSQQDDASKIHDYISRSMDLSSENESIDLSSTSEDSVGYWQ 320
            +E+ E+  P+ + +     SQQ D   +H+Y     D  S+++S D  S SE+    W+
Sbjct: 85  EKEVVEELNPEVEPIIHCDASQQSDVCDMHEYQVEPTDFPSDSDSSDDFSASENFELSWR 144

Query: 319 SGSNMGGLLT------CXXXXXXXXXSLIEIALPEGHYICPIDETKFKWQPSFPESIFQQ 158
              N+G  +                  LIEI+LP  + +   +E+K K   + PESIF+Q
Sbjct: 145 CSENVGQSIAVSESSISENDVDEDGDGLIEISLPLNNSVDFDEESKKKSVSNLPESIFRQ 204

Query: 157 XXXXXXXXXXXXXXXXXXXXEIDISMGSIKC 65
                               EID+SMGSIKC
Sbjct: 205 QGLMELFAEIAEVNEEENLIEIDLSMGSIKC 235


>ref|XP_002522757.1| conserved hypothetical protein [Ricinus communis]
           gi|223537995|gb|EEF39608.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 247

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 73/243 (30%), Positives = 107/243 (44%), Gaps = 22/243 (9%)
 Frame = -3

Query: 724 MKKTAICQMCST--FFSLGTHYW---VHGAVVALFLIFAVSFTCLLTSILLYFLAIFAAF 560
           M KTA  Q+ S+  FF L    +   V   V   F  F +       SILL+       F
Sbjct: 1   MWKTAEKQISSSQCFFILSLLSFAVLVSSIVFICFPSFGLFPFLATISILLFSTVFVVTF 60

Query: 559 TKLK--SGVKC----ENISSSLNTSVVEELGEQQK--PKEKEVTADKLSQQDDASKIHDY 404
           +K K  +G       E   S+ N +++E   E+QK   + + VT +  +QQ + S IH+Y
Sbjct: 61  SKQKVITGKNPTQDEEGSMSTPNNNLLENEVEEQKLSAELEAVTFNNSAQQSEVSDIHEY 120

Query: 403 ISRSMDLSSENESIDLSSTSEDSVGYWQSGSNMG---GLLTC--XXXXXXXXXSLIEIAL 239
              S D  S +ES D  S S++    W S +N+G    +  C           +LIEI+ 
Sbjct: 121 QVESTDFPSASESSDDFSASDNFELNWMSFNNVGKNVAISECSISSSDDDEDDNLIEISF 180

Query: 238 PEGHYICPIDETKFKWQPS----FPESIFQQXXXXXXXXXXXXXXXXXXXXEIDISMGSI 71
           P+ +     +E++ K Q      FPESIF+Q                    EID+S+GSI
Sbjct: 181 PDNNSSELNEESEEKLQTELPEYFPESIFRQEGLMELLAEISEVNEEENLIEIDLSVGSI 240

Query: 70  KCS 62
           K S
Sbjct: 241 KGS 243


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