BLASTX nr result
ID: Coptis23_contig00023285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00023285 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308261.1| predicted protein [Populus trichocarpa] gi|2... 88 3e-18 ref|XP_002323090.1| predicted protein [Populus trichocarpa] gi|2... 86 4e-17 ref|XP_002520116.1| UDP-galactose transporter, putative [Ricinus... 88 5e-17 ref|XP_004135189.1| PREDICTED: UDP-galactose/UDP-glucose transpo... 86 2e-16 ref|NP_563949.1| UDP-galactose transporter 3 [Arabidopsis thalia... 85 3e-16 >ref|XP_002308261.1| predicted protein [Populus trichocarpa] gi|222854237|gb|EEE91784.1| predicted protein [Populus trichocarpa] Length = 335 Score = 87.8 bits (216), Expect(3) = 3e-18 Identities = 43/52 (82%), Positives = 46/52 (88%) Frame = +3 Query: 3 HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158 HP+AAW+IFL+CLCGAV QNFIFLTI RFGSLANTTITT KFVS V SSVL Sbjct: 243 HPEAAWDIFLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 294 Score = 25.8 bits (55), Expect(3) = 3e-18 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1 Query: 205 LSYHIYLK*RKFQKKRK 255 LSY IYLK RK QK +K Sbjct: 314 LSYQIYLKWRKLQKLQK 330 Score = 22.7 bits (47), Expect(3) = 3e-18 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = +2 Query: 161 LSAKQ*SSVVMVFPGF-HTIYI 223 LSAKQ VVMVF G + IY+ Sbjct: 299 LSAKQWGCVVMVFSGLSYQIYL 320 >ref|XP_002323090.1| predicted protein [Populus trichocarpa] gi|222867720|gb|EEF04851.1| predicted protein [Populus trichocarpa] Length = 332 Score = 85.5 bits (210), Expect(3) = 4e-17 Identities = 42/52 (80%), Positives = 45/52 (86%) Frame = +3 Query: 3 HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158 HP+AAW+I L+CLCGAV QNFIFLTI RFGSLANTTITT KFVS V SSVL Sbjct: 240 HPEAAWDILLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 291 Score = 25.8 bits (55), Expect(3) = 4e-17 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1 Query: 205 LSYHIYLK*RKFQKKRK 255 LSY IYLK RK QK +K Sbjct: 311 LSYQIYLKWRKLQKLQK 327 Score = 21.2 bits (43), Expect(3) = 4e-17 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +2 Query: 161 LSAKQ*SSVVMVFPGF-HTIYI 223 LSAKQ V MVF G + IY+ Sbjct: 296 LSAKQWGCVAMVFSGLSYQIYL 317 >ref|XP_002520116.1| UDP-galactose transporter, putative [Ricinus communis] gi|223540608|gb|EEF42171.1| UDP-galactose transporter, putative [Ricinus communis] Length = 333 Score = 87.8 bits (216), Expect(2) = 5e-17 Identities = 43/52 (82%), Positives = 46/52 (88%) Frame = +3 Query: 3 HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158 HP+AAW+IFL+CLCGAV QNFIFLTI RFGSLANTTITT KFVS V SSVL Sbjct: 241 HPEAAWDIFLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 292 Score = 24.6 bits (52), Expect(2) = 5e-17 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +1 Query: 205 LSYHIYLK*RKFQKKRK 255 LSY IYLK +K QK +K Sbjct: 312 LSYQIYLKWKKLQKLQK 328 >ref|XP_004135189.1| PREDICTED: UDP-galactose/UDP-glucose transporter 3-like [Cucumis sativus] gi|449478437|ref|XP_004155318.1| PREDICTED: UDP-galactose/UDP-glucose transporter 3-like [Cucumis sativus] Length = 332 Score = 85.5 bits (210), Expect(2) = 2e-16 Identities = 42/52 (80%), Positives = 45/52 (86%) Frame = +3 Query: 3 HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158 HP+AAW+I L+CLCGAV QNFIFLTI RFGSLANTTITT KFVS V SSVL Sbjct: 240 HPEAAWDILLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 291 Score = 25.0 bits (53), Expect(2) = 2e-16 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 3/21 (14%) Frame = +1 Query: 205 LSYHIYLK*RKFQK---KRKS 258 LSY IYLK RK QK KRK+ Sbjct: 311 LSYQIYLKWRKLQKLQRKRKT 331 >ref|NP_563949.1| UDP-galactose transporter 3 [Arabidopsis thaliana] gi|75191462|sp|Q9M9S6.1|UTR3_ARATH RecName: Full=UDP-galactose/UDP-glucose transporter 3; Short=AtUTr3 gi|7262678|gb|AAF43936.1|AC012188_13 Contains similarity to UDP-galactose transporter from Homo sapiens gi|2136347. ESTs gb|AI992640, gb|W43266 come from this gene [Arabidopsis thaliana] gi|12083308|gb|AAG48813.1|AF332450_1 unknown protein [Arabidopsis thaliana] gi|16649145|gb|AAL24424.1| Unknown protein [Arabidopsis thaliana] gi|21387029|gb|AAM47918.1| unknown protein [Arabidopsis thaliana] gi|332191031|gb|AEE29152.1| UDP-galactose transporter 3 [Arabidopsis thaliana] Length = 331 Score = 84.7 bits (208), Expect(2) = 3e-16 Identities = 41/52 (78%), Positives = 45/52 (86%) Frame = +3 Query: 3 HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158 HP+AAW+I ++CLCGAV QNFIFLTI RFGSLANTTITT KFVS V SSVL Sbjct: 240 HPEAAWDILMYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 291 Score = 25.0 bits (53), Expect(2) = 3e-16 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +1 Query: 205 LSYHIYLK*RKFQKKRK 255 LSY IYLK RK Q+ +K Sbjct: 311 LSYQIYLKWRKLQRMQK 327