BLASTX nr result

ID: Coptis23_contig00023285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023285
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308261.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-18
ref|XP_002323090.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-17
ref|XP_002520116.1| UDP-galactose transporter, putative [Ricinus...    88   5e-17
ref|XP_004135189.1| PREDICTED: UDP-galactose/UDP-glucose transpo...    86   2e-16
ref|NP_563949.1| UDP-galactose transporter 3 [Arabidopsis thalia...    85   3e-16

>ref|XP_002308261.1| predicted protein [Populus trichocarpa] gi|222854237|gb|EEE91784.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 87.8 bits (216), Expect(3) = 3e-18
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +3

Query: 3   HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158
           HP+AAW+IFL+CLCGAV QNFIFLTI RFGSLANTTITT  KFVS V SSVL
Sbjct: 243 HPEAAWDIFLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 294



 Score = 25.8 bits (55), Expect(3) = 3e-18
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 LSYHIYLK*RKFQKKRK 255
           LSY IYLK RK QK +K
Sbjct: 314 LSYQIYLKWRKLQKLQK 330



 Score = 22.7 bits (47), Expect(3) = 3e-18
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 161 LSAKQ*SSVVMVFPGF-HTIYI 223
           LSAKQ   VVMVF G  + IY+
Sbjct: 299 LSAKQWGCVVMVFSGLSYQIYL 320


>ref|XP_002323090.1| predicted protein [Populus trichocarpa] gi|222867720|gb|EEF04851.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 85.5 bits (210), Expect(3) = 4e-17
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 3   HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158
           HP+AAW+I L+CLCGAV QNFIFLTI RFGSLANTTITT  KFVS V SSVL
Sbjct: 240 HPEAAWDILLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 291



 Score = 25.8 bits (55), Expect(3) = 4e-17
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 LSYHIYLK*RKFQKKRK 255
           LSY IYLK RK QK +K
Sbjct: 311 LSYQIYLKWRKLQKLQK 327



 Score = 21.2 bits (43), Expect(3) = 4e-17
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +2

Query: 161 LSAKQ*SSVVMVFPGF-HTIYI 223
           LSAKQ   V MVF G  + IY+
Sbjct: 296 LSAKQWGCVAMVFSGLSYQIYL 317


>ref|XP_002520116.1| UDP-galactose transporter, putative [Ricinus communis]
           gi|223540608|gb|EEF42171.1| UDP-galactose transporter,
           putative [Ricinus communis]
          Length = 333

 Score = 87.8 bits (216), Expect(2) = 5e-17
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +3

Query: 3   HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158
           HP+AAW+IFL+CLCGAV QNFIFLTI RFGSLANTTITT  KFVS V SSVL
Sbjct: 241 HPEAAWDIFLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 292



 Score = 24.6 bits (52), Expect(2) = 5e-17
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 LSYHIYLK*RKFQKKRK 255
           LSY IYLK +K QK +K
Sbjct: 312 LSYQIYLKWKKLQKLQK 328


>ref|XP_004135189.1| PREDICTED: UDP-galactose/UDP-glucose transporter 3-like [Cucumis
           sativus] gi|449478437|ref|XP_004155318.1| PREDICTED:
           UDP-galactose/UDP-glucose transporter 3-like [Cucumis
           sativus]
          Length = 332

 Score = 85.5 bits (210), Expect(2) = 2e-16
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 3   HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158
           HP+AAW+I L+CLCGAV QNFIFLTI RFGSLANTTITT  KFVS V SSVL
Sbjct: 240 HPEAAWDILLYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 291



 Score = 25.0 bits (53), Expect(2) = 2e-16
 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 3/21 (14%)
 Frame = +1

Query: 205 LSYHIYLK*RKFQK---KRKS 258
           LSY IYLK RK QK   KRK+
Sbjct: 311 LSYQIYLKWRKLQKLQRKRKT 331


>ref|NP_563949.1| UDP-galactose transporter 3 [Arabidopsis thaliana]
           gi|75191462|sp|Q9M9S6.1|UTR3_ARATH RecName:
           Full=UDP-galactose/UDP-glucose transporter 3;
           Short=AtUTr3 gi|7262678|gb|AAF43936.1|AC012188_13
           Contains similarity to UDP-galactose transporter from
           Homo sapiens gi|2136347. ESTs gb|AI992640, gb|W43266
           come from this gene [Arabidopsis thaliana]
           gi|12083308|gb|AAG48813.1|AF332450_1 unknown protein
           [Arabidopsis thaliana] gi|16649145|gb|AAL24424.1|
           Unknown protein [Arabidopsis thaliana]
           gi|21387029|gb|AAM47918.1| unknown protein [Arabidopsis
           thaliana] gi|332191031|gb|AEE29152.1| UDP-galactose
           transporter 3 [Arabidopsis thaliana]
          Length = 331

 Score = 84.7 bits (208), Expect(2) = 3e-16
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +3

Query: 3   HPKAAWNIFLFCLCGAVRQNFIFLTICRFGSLANTTITTIWKFVSTVDSSVL 158
           HP+AAW+I ++CLCGAV QNFIFLTI RFGSLANTTITT  KFVS V SSVL
Sbjct: 240 HPEAAWDILMYCLCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVL 291



 Score = 25.0 bits (53), Expect(2) = 3e-16
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 LSYHIYLK*RKFQKKRK 255
           LSY IYLK RK Q+ +K
Sbjct: 311 LSYQIYLKWRKLQRMQK 327


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