BLASTX nr result

ID: Coptis23_contig00023282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023282
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002526027.1| Prolactin regulatory element-binding protein...   147   9e-34
ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis ...   145   3e-33
emb|CAN77008.1| hypothetical protein VITISV_036876 [Vitis vinifera]   145   3e-33
ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32

>ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|222852263|gb|EEE89810.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/101 (68%), Positives = 84/101 (83%)
 Frame = +3

Query: 3   SGIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKSCRWFEWD 182
           SGIPN++LLS F+ +SNSLSP P+ KL  G+DLPYRM VHPGGDG+IC+ P SCR+FEWD
Sbjct: 64  SGIPNAVLLSRFDFSSNSLSPQPVPKLNLGSDLPYRMVVHPGGDGLICALPNSCRFFEWD 123

Query: 183 VPESSETYKLDLKSSEKILTQMEDVGQQLAMTFNADGSALA 305
             E +E +KL LKSSEK+LTQ+EDVGQQLA+ FN+D S LA
Sbjct: 124 EVEDNEDHKLGLKSSEKVLTQLEDVGQQLALVFNSDSSVLA 164


>ref|XP_002526027.1| Prolactin regulatory element-binding protein, putative [Ricinus
           communis] gi|223534674|gb|EEF36367.1| Prolactin
           regulatory element-binding protein, putative [Ricinus
           communis]
          Length = 390

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/101 (66%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   SGIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKSCRWFEWD 182
           SGIPN+++LS F+ T NSLSP P++KLGTG+DLPYRM VHPGGDG++C+ P SCR+FEWD
Sbjct: 65  SGIPNALVLSRFDFTFNSLSPQPVAKLGTGSDLPYRMVVHPGGDGLVCALPNSCRFFEWD 124

Query: 183 VPESSETYKLDLKSSEKILTQMEDVGQQLAMTFNADGSALA 305
             + +E +KL LK SEK LTQ+EDVGQQLA+ FN++ SALA
Sbjct: 125 EVKDNEAHKLGLKESEKALTQLEDVGQQLALAFNSESSALA 165


>ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis vinifera]
          Length = 394

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/101 (67%), Positives = 83/101 (82%)
 Frame = +3

Query: 3   SGIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKSCRWFEWD 182
           SGIPN++LL+ F+  SNSLS  P+ KLG GADLPYRMAVHPGG+G+ICS PKSC+WF+WD
Sbjct: 72  SGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQWD 131

Query: 183 VPESSETYKLDLKSSEKILTQMEDVGQQLAMTFNADGSALA 305
             ++ E +K  LK SEK+LT +EDVGQQLA+TFN DGS LA
Sbjct: 132 EIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLA 172


>emb|CAN77008.1| hypothetical protein VITISV_036876 [Vitis vinifera]
          Length = 369

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/101 (67%), Positives = 83/101 (82%)
 Frame = +3

Query: 3   SGIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKSCRWFEWD 182
           SGIPN++LL+ F+  SNSLS  P+ KLG GADLPYRMAVHPGG+G+ICS PKSC+WF+WD
Sbjct: 72  SGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQWD 131

Query: 183 VPESSETYKLDLKSSEKILTQMEDVGQQLAMTFNADGSALA 305
             ++ E +K  LK SEK+LT +EDVGQQLA+TFN DGS LA
Sbjct: 132 EIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLA 172


>ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|222863844|gb|EEF00975.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/101 (64%), Positives = 84/101 (83%)
 Frame = +3

Query: 3   SGIPNSILLSLFNPTSNSLSPTPMSKLGTGADLPYRMAVHPGGDGVICSFPKSCRWFEWD 182
           SGIPN++LLS F+ +SNSL+  P++KLG G+ LPYRM VHPGGDGVIC+FP SCR+F+WD
Sbjct: 80  SGIPNAVLLSCFDFSSNSLASQPVAKLGLGSQLPYRMVVHPGGDGVICAFPSSCRFFDWD 139

Query: 183 VPESSETYKLDLKSSEKILTQMEDVGQQLAMTFNADGSALA 305
             + +E +KL LK S+K+LTQ+EDVGQQLA+ FN+D S LA
Sbjct: 140 EVKDNEDHKLGLKPSKKVLTQLEDVGQQLALAFNSDSSVLA 180


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