BLASTX nr result

ID: Coptis23_contig00023278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023278
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27828.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249...   117   1e-24
emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]   115   3e-24
ref|XP_002514060.1| conserved hypothetical protein [Ricinus comm...   114   8e-24
ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259...   110   2e-22

>emb|CBI27828.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 6/111 (5%)
 Frame = -2

Query: 320 FTHMLHGRFKSKNDLRNYSLHPEHLSVANDIVNPICDDIMVLNWVAD-LHGPIVPPVGVV 144
           FTHMLH R+ SK DL  YS HP H+SV  ++V PIC+D+M ++WVAD + GP+VP  G  
Sbjct: 59  FTHMLHSRYSSKEDLSVYSGHPSHMSVVKELVLPICEDVMAVDWVADNISGPVVPRPGSA 118

Query: 143 MRVSFFKLQED-----VLKIVGGIKDHYSGSNVQITFGENFSPAKAKGFSI 6
           MR++F +L ED     +L  +G IKD   GS  Q+T+GENFSPA+AKGFSI
Sbjct: 119 MRLTFMRLNEDEEKAKILGAIGDIKD-CLGSLNQMTYGENFSPARAKGFSI 168


>ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249118 [Vitis vinifera]
          Length = 261

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/114 (54%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
 Frame = -2

Query: 320 FTHMLHGRFKSKNDLRNYSLHPEHLSVANDIVNPICDDIMVLNWVAD-LHGPIVPPVGVV 144
           FTHMLH R+ SK DL  YS HP H+SV  ++V PIC+D+M ++WVAD + GP+VP  G  
Sbjct: 98  FTHMLHSRYSSKEDLSVYSGHPSHMSVVKELVLPICEDVMAVDWVADNISGPVVPRPGSA 157

Query: 143 MRVSFFKL--------QEDVLKIVGGIKDHYSGSNVQITFGENFSPAKAKGFSI 6
           MR++F +L        +E VL  VG IKD   GS  Q+T+GENFSPA+AKGFSI
Sbjct: 158 MRLTFMRLNEGLGDEEKEKVLGAVGEIKD-CLGSLDQMTYGENFSPARAKGFSI 210


>emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]
          Length = 225

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/114 (54%), Positives = 78/114 (68%), Gaps = 9/114 (7%)
 Frame = -2

Query: 320 FTHMLHGRFKSKNDLRNYSLHPEHLSVANDIVNPICDDIMVLNWVAD-LHGPIVPPVGVV 144
           FTHMLH R+ SK DL  YS HP H+SV  + V PIC+D+M ++WVAD + GP+VP  G  
Sbjct: 62  FTHMLHSRYSSKEDLSVYSGHPSHMSVVKESVLPICEDVMAVDWVADNJSGPVVPRPGSA 121

Query: 143 MRVSFFKL--------QEDVLKIVGGIKDHYSGSNVQITFGENFSPAKAKGFSI 6
           MR++F +L        +E VL  VG IKD   GS  Q+T+GENFSPA+AKGFSI
Sbjct: 122 MRLTFMRLNEGLGDEEKEKVLGAVGEIKD-CLGSLDQMTYGENFSPARAKGFSI 174


>ref|XP_002514060.1| conserved hypothetical protein [Ricinus communis]
           gi|223546516|gb|EEF48014.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 10/115 (8%)
 Frame = -2

Query: 320 FTHMLHGRFKSKNDLRNYSLHPEHLSVANDIVNPICDDIMVLNWVAD--LHGPIVPPVGV 147
           FTHMLH R+ SK++L  YS HP H+SV  + V P+CDDIM ++W+AD    G +VPP G 
Sbjct: 57  FTHMLHSRYSSKDNLNTYSSHPSHVSVVKENVLPVCDDIMAVDWIADDVDAGNLVPPPGS 116

Query: 146 VMRVSFFKLQE--------DVLKIVGGIKDHYSGSNVQITFGENFSPAKAKGFSI 6
            +RV+F KL+E        ++L ++ GIK  + G   Q+T GENFSP +AKG+SI
Sbjct: 117 AIRVTFLKLKENLGEEVKNEILAVIKGIKGSFGGVIKQLTCGENFSPGRAKGYSI 171


>ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259336 isoform 1 [Vitis
           vinifera] gi|359484443|ref|XP_003633110.1| PREDICTED:
           uncharacterized protein LOC100259336 isoform 2 [Vitis
           vinifera]
          Length = 223

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/113 (52%), Positives = 76/113 (67%), Gaps = 8/113 (7%)
 Frame = -2

Query: 320 FTHMLHGRFKSKNDLRNYSLHPEHLSVANDIVNPICDDIMVLNWVA-DLHGPIVPPVGVV 144
           FTHMLH R+ SK DL  YS HP HL V  ++ +PI +D+M ++WVA DL GP+VP  G  
Sbjct: 59  FTHMLHSRYSSKEDLSGYSGHPSHLRVVKELGSPILEDLMAVDWVADDLSGPVVPRPGSA 118

Query: 143 MRVSFFKLQ-----EDVLKIVGGIKD--HYSGSNVQITFGENFSPAKAKGFSI 6
           MR++  KL+     E+  KI+G I D     GS  Q+T+GENFSPA+AKGFSI
Sbjct: 119 MRLTIMKLKGGLGDEEKAKILGAIGDIKDCLGSLNQMTYGENFSPARAKGFSI 171


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