BLASTX nr result

ID: Coptis23_contig00023274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023274
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285453.1| PREDICTED: probable 3-beta-hydroxysteroid-De...    69   5e-10
gb|ABU95101.1| putative C-8,7 sterol isomerase [Solanum tuberosum]     63   2e-08
ref|XP_002455349.1| hypothetical protein SORBIDRAFT_03g009020 [S...    60   2e-07
ref|XP_002455350.1| hypothetical protein SORBIDRAFT_03g009040 [S...    59   3e-07
ref|XP_002455347.1| hypothetical protein SORBIDRAFT_03g008980 [S...    59   3e-07

>ref|XP_002285453.1| PREDICTED: probable
           3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
           isoform 2 [Vitis vinifera]
           gi|225435456|ref|XP_002285450.1| PREDICTED: probable
           3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
           isoform 1 [Vitis vinifera] gi|297746323|emb|CBI16379.3|
           unnamed protein product [Vitis vinifera]
          Length = 222

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 5   ASSHYYYLYYVFMNSFWVWIPALIVIRSWKRICTSFQAEAQSEKK 139
           AS++YYY YYVF N+FWV IP+LIVIR WK+IC +FQ + Q + K
Sbjct: 176 ASAYYYYAYYVFANAFWVVIPSLIVIRCWKKICAAFQVQGQQKTK 220


>gb|ABU95101.1| putative C-8,7 sterol isomerase [Solanum tuberosum]
          Length = 221

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/45 (57%), Positives = 29/45 (64%)
 Frame = +2

Query: 8   SSHYYYLYYVFMNSFWVWIPALIVIRSWKRICTSFQAEAQSEKKR 142
           S  YYY YYVF N FWVWIP+LIVI  WK+IC +     Q  K R
Sbjct: 177 SPFYYYAYYVFANHFWVWIPSLIVIHCWKKICAAVNVHEQKTKTR 221


>ref|XP_002455349.1| hypothetical protein SORBIDRAFT_03g009020 [Sorghum bicolor]
           gi|241927324|gb|EES00469.1| hypothetical protein
           SORBIDRAFT_03g009020 [Sorghum bicolor]
          Length = 214

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +2

Query: 17  YYYLYYVFMNSFWVWIPALIVIRSWKRICTSFQAEAQSEK 136
           Y++ Y++  NSFW+WIP LI IRSWK IC +FQAE    K
Sbjct: 175 YFWAYFIGANSFWIWIPMLIAIRSWKEICAAFQAEKVKTK 214


>ref|XP_002455350.1| hypothetical protein SORBIDRAFT_03g009040 [Sorghum bicolor]
           gi|241927325|gb|EES00470.1| hypothetical protein
           SORBIDRAFT_03g009040 [Sorghum bicolor]
          Length = 214

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +2

Query: 17  YYYLYYVFMNSFWVWIPALIVIRSWKRICTSFQAE 121
           Y++ Y++  NSFW+WIP LI IRSWK IC +FQAE
Sbjct: 175 YFWAYFIGANSFWIWIPMLIAIRSWKEICAAFQAE 209


>ref|XP_002455347.1| hypothetical protein SORBIDRAFT_03g008980 [Sorghum bicolor]
           gi|241927322|gb|EES00467.1| hypothetical protein
           SORBIDRAFT_03g008980 [Sorghum bicolor]
          Length = 218

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +2

Query: 8   SSHYYYLYYVFMNSFWVWIPALIVIRSWKRICTSFQAEAQSEKK 139
           S  Y++ Y++  NSFWVWIP LI +RSWK IC +F+AE   + K
Sbjct: 175 SPFYFWAYFISANSFWVWIPTLIAMRSWKMICAAFRAEMAKKTK 218


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