BLASTX nr result

ID: Coptis23_contig00023272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023272
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE51648.1| hypothetical protein OsJ_32955 [Oryza sativa Japo...    80   1e-13
gb|EAY82242.1| hypothetical protein OsI_37447 [Oryza sativa Indi...    80   1e-13
emb|CBX25300.1| hypothetical_protein [Oryza brachyantha]               79   3e-13
sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination prote...    78   7e-13
ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC...    77   1e-12

>gb|EEE51648.1| hypothetical protein OsJ_32955 [Oryza sativa Japonica Group]
          Length = 391

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = +2

Query: 2   DPRKPVRG*VLAHAATVRLMLRKGKGEQRICKVFDSPNLPESKLYPQTCIIICLPS*PDQ 181
           DP+KP  G VLAHAAT+RLMLRKGKGEQR+CK+FD+PNLPE +      +  CL      
Sbjct: 287 DPKKPAGGHVLAHAATIRLMLRKGKGEQRVCKIFDAPNLPEGEAISFCIVHTCL------ 340

Query: 182 QEHQVKLLIEIIVL 223
               +KLL++++ L
Sbjct: 341 ----LKLLVQLVTL 350


>gb|EAY82242.1| hypothetical protein OsI_37447 [Oryza sativa Indica Group]
          Length = 348

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = +2

Query: 2   DPRKPVRG*VLAHAATVRLMLRKGKGEQRICKVFDSPNLPESKLYPQTCIIICLPS*PDQ 181
           DP+KP  G VLAHAAT+RLMLRKGKGEQR+CK+FD+PNLPE +      +  CL      
Sbjct: 244 DPKKPAGGHVLAHAATIRLMLRKGKGEQRVCKIFDAPNLPEGEAISFCIVHTCL------ 297

Query: 182 QEHQVKLLIEIIVL 223
               +KLL++++ L
Sbjct: 298 ----LKLLVQLVTL 307


>emb|CBX25300.1| hypothetical_protein [Oryza brachyantha]
          Length = 268

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   DPRKPVRG*VLAHAATVRLMLRKGKGEQRICKVFDSPNLPESKLYPQTCI-IICLPS*PD 178
           DP+KP  G VLAHAAT+RLMLRKGKGEQR+CK+FD+PNLPE +      I  +CLP    
Sbjct: 202 DPKKPAGGHVLAHAATIRLMLRKGKGEQRVCKIFDAPNLPEGEAISFYIIYTLCLP---- 257

Query: 179 QQEHQVKLLIEIIVL 223
                 KLL++++ L
Sbjct: 258 ------KLLVQLVSL 266


>sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination protein DMC1 homolog
           gi|431168|dbj|BAA04845.1| RAD51-like protein [Lilium
           longiflorum]
          Length = 349

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   DPRKPVRG*VLAHAATVRLMLRKGKGEQRICKVFDSPNLPESK 130
           DP+KP  G VLAHAATVRLMLRKGKGEQR+CK+FD+PNLPES+
Sbjct: 292 DPKKPAGGHVLAHAATVRLMLRKGKGEQRVCKIFDAPNLPESE 334


>ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
           sativus] gi|449504138|ref|XP_004162263.1| PREDICTED:
           meiotic recombination protein DMC1 homolog [Cucumis
           sativus]
          Length = 345

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   DPRKPVRG*VLAHAATVRLMLRKGKGEQRICKVFDSPNLPESK 130
           DP+KP  G VLAHAATVRLM RKGKGEQRICKVFD+PNLPES+
Sbjct: 288 DPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESE 330


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