BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023269
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...    50   5e-06

>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score = 50.4 bits (119), Expect(2) = 5e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = -3

Query: 220 P*LSQLNELTCDASESVIGCLSE*QTHCI--FSQKISGAKSKSSNSDRELYAIIQAIKHW 47
           P  S++ E+ CDAS   IG +   + H I  FS K+SGAK   S  D+E YA++Q+++HW
Sbjct: 238 PDFSKVFEVACDASGIGIGGVLSQEKHPIAYFSAKLSGAKLNYSTYDKEFYAVVQSLRHW 297



 Score = 24.6 bits (52), Expect(2) = 5e-06
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 306 RSPFSCPHEAAEEDDLAKKKMTTAPTLALPD 214
           +  F    EAA      K++MT AP + LPD
Sbjct: 209 KEEFRWSEEAATAFKEIKQRMTDAPVMRLPD 239