BLASTX nr result

ID: Coptis23_contig00023265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023265
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001779227.1| predicted protein [Physcomitrella patens sub...    59   4e-07
ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus...    57   2e-06
ref|XP_003536100.1| PREDICTED: cyclin-L1-1-like [Glycine max]          57   2e-06
ref|XP_003614534.1| Cyclin-L1-1 [Medicago truncatula] gi|3555158...    57   2e-06
ref|XP_003611078.1| Cyclin-L1-1 [Medicago truncatula] gi|3555124...    57   2e-06

>ref|XP_001779227.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162669402|gb|EDQ55990.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 261

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +3

Query: 78  IITNKPQAVMATGQVLFHRFYCKKSFALFSVK 173
           I+   PQAVMATGQVLFHRFYCKKSFALF+VK
Sbjct: 47  ILLKLPQAVMATGQVLFHRFYCKKSFALFNVK 78


>ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus]
           gi|449485709|ref|XP_004157252.1| PREDICTED:
           cyclin-L1-1-like [Cucumis sativus]
          Length = 443

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 78  IITNKPQAVMATGQVLFHRFYCKKSFALFSVK 173
           I+   PQAVMATGQVLFHRFYCKKSFA F+VK
Sbjct: 47  ILLKLPQAVMATGQVLFHRFYCKKSFARFNVK 78


>ref|XP_003536100.1| PREDICTED: cyclin-L1-1-like [Glycine max]
          Length = 448

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 78  IITNKPQAVMATGQVLFHRFYCKKSFALFSVK 173
           I+   PQAVMATGQVLFHRFYCKKSFA F+VK
Sbjct: 47  ILLRLPQAVMATGQVLFHRFYCKKSFARFNVK 78


>ref|XP_003614534.1| Cyclin-L1-1 [Medicago truncatula] gi|355515869|gb|AES97492.1|
           Cyclin-L1-1 [Medicago truncatula]
          Length = 428

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 78  IITNKPQAVMATGQVLFHRFYCKKSFALFSVK 173
           I+   PQAVMATGQVLFHRFYCKKSFA F+VK
Sbjct: 47  ILLRLPQAVMATGQVLFHRFYCKKSFARFNVK 78


>ref|XP_003611078.1| Cyclin-L1-1 [Medicago truncatula] gi|355512413|gb|AES94036.1|
           Cyclin-L1-1 [Medicago truncatula]
          Length = 438

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 78  IITNKPQAVMATGQVLFHRFYCKKSFALFSVK 173
           I+   PQAVMATGQVLFHRFYCKKSFA F+VK
Sbjct: 47  ILLRLPQAVMATGQVLFHRFYCKKSFARFNVK 78


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