BLASTX nr result

ID: Coptis23_contig00023258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023258
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274080.1| PREDICTED: uncharacterized protein LOC100250...   154   6e-36
ref|XP_002331071.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002529052.1| conserved hypothetical protein [Ricinus comm...   145   4e-33
ref|XP_003617709.1| hypothetical protein MTR_5g094600 [Medicago ...   140   1e-31
ref|XP_003544695.1| PREDICTED: uncharacterized protein LOC100777...   134   1e-29

>ref|XP_002274080.1| PREDICTED: uncharacterized protein LOC100250451 [Vitis vinifera]
           gi|297737538|emb|CBI26739.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/101 (72%), Positives = 88/101 (87%), Gaps = 1/101 (0%)
 Frame = -3

Query: 363 SRNNRIKLSS-QPCKIRAISEVAAATTADPAQVELSWEIVVGALAGVTPFVVAGIEFSKR 187
           SR+N ++ S  Q  ++  +++V+A   ADPAQVE++W+IVVGALAGVTPF+VAGIEFSKR
Sbjct: 36  SRSNLLRKSRRQTARVSVVNDVSAV--ADPAQVEVTWQIVVGALAGVTPFIVAGIEFSKR 93

Query: 186 IVAQRRCGVCKGSGLVLRDKHYFRCPRCGGFLPWQSWKRFF 64
           IVAQ+RCGVC GSGLVLRDK+YFRCP CGGFLPWQSWKRFF
Sbjct: 94  IVAQKRCGVCGGSGLVLRDKYYFRCPGCGGFLPWQSWKRFF 134


>ref|XP_002331071.1| predicted protein [Populus trichocarpa] gi|222873035|gb|EEF10166.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/87 (75%), Positives = 76/87 (87%)
 Frame = -3

Query: 324 KIRAISEVAAATTADPAQVELSWEIVVGALAGVTPFVVAGIEFSKRIVAQRRCGVCKGSG 145
           KI AI++   +  AD AQVE++W+I+VGA+AGVTPFVVAGIEFSKRI+AQRRC VC GSG
Sbjct: 13  KISAINDYGISAAADIAQVEVTWQIIVGAIAGVTPFVVAGIEFSKRIIAQRRCQVCGGSG 72

Query: 144 LVLRDKHYFRCPRCGGFLPWQSWKRFF 64
           LVLRDK YFRCP CGGFLPWQ+WKRFF
Sbjct: 73  LVLRDKDYFRCPGCGGFLPWQTWKRFF 99


>ref|XP_002529052.1| conserved hypothetical protein [Ricinus communis]
           gi|223531532|gb|EEF33363.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 150

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/92 (72%), Positives = 80/92 (86%)
 Frame = -3

Query: 321 IRAISEVAAATTADPAQVELSWEIVVGALAGVTPFVVAGIEFSKRIVAQRRCGVCKGSGL 142
           I A++EV+AA  AD  QVE++W+I+VGA+AGVTPFVVAGIEFSKRI+AQRRC +C G+GL
Sbjct: 48  IAAVNEVSAA--ADSGQVEVTWQIIVGAVAGVTPFVVAGIEFSKRIIAQRRCEICGGAGL 105

Query: 141 VLRDKHYFRCPRCGGFLPWQSWKRFFQVK*SF 46
           V+R+K YFRCP CGGFLPWQSWKRFF V  SF
Sbjct: 106 VMREKDYFRCPGCGGFLPWQSWKRFFSVSMSF 137


>ref|XP_003617709.1| hypothetical protein MTR_5g094600 [Medicago truncatula]
           gi|355519044|gb|AET00668.1| hypothetical protein
           MTR_5g094600 [Medicago truncatula]
           gi|388506926|gb|AFK41529.1| unknown [Medicago
           truncatula]
          Length = 138

 Score =  140 bits (352), Expect = 1e-31
 Identities = 61/87 (70%), Positives = 72/87 (82%)
 Frame = -3

Query: 324 KIRAISEVAAATTADPAQVELSWEIVVGALAGVTPFVVAGIEFSKRIVAQRRCGVCKGSG 145
           +I  +S     T  DPA VE++W+IVVG +AG+TPFVVAGIEFSKRI+AQ+RC +C GSG
Sbjct: 50  RIGVVSVSDVTTVLDPAPVEITWQIVVGTIAGITPFVVAGIEFSKRIIAQKRCEMCGGSG 109

Query: 144 LVLRDKHYFRCPRCGGFLPWQSWKRFF 64
           LV RDK+YFRCP CGGFLPWQSWKRFF
Sbjct: 110 LVFRDKNYFRCPECGGFLPWQSWKRFF 136


>ref|XP_003544695.1| PREDICTED: uncharacterized protein LOC100777123 [Glycine max]
          Length = 141

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/105 (61%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
 Frame = -3

Query: 372 IHNSRNNRIKLSSQPCKIRAISEVAAATTADPAQVELSWEIVVGALAGVTPFVVAGIEFS 193
           + N+R  R+  ++ P  +  ++     T  DPA VE++W+IVVGA+AGVTPFVVAGIEFS
Sbjct: 42  VKNARRTRV--TAVPVNVDDVT-----TVLDPAPVEVTWQIVVGAIAGVTPFVVAGIEFS 94

Query: 192 KRIVAQRRCGVCKGSGLVLRDKH--YFRCPRCGGFLPWQSWKRFF 64
           KRI+AQ+RC VC GSGLVLR+K   Y RCP CGGFLPWQSWKRFF
Sbjct: 95  KRIIAQKRCEVCGGSGLVLREKEKDYLRCPECGGFLPWQSWKRFF 139


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