BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023252
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
emb|CBI30028.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...   122   4e-26
ref|XP_002529957.1| Non-structural maintenance of chromosome ele...   118   6e-25
ref|XP_003571216.1| PREDICTED: non-structural maintenance of chr...   116   2e-24

>ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|222867916|gb|EEF05047.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/104 (58%), Positives = 74/104 (71%)
 Frame = +1

Query: 1   NGHHLVSPKNXXXXXXXXSGEVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITN 180
           NG HLVSP+N        SGEV+Y HF FR DFKDWKLM+ +V  GEELMP+R Q  + +
Sbjct: 209 NGWHLVSPRNAPDAGKVVSGEVAYRHFVFRFDFKDWKLMISAVEVGEELMPNRNQINMPS 268

Query: 181 DFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSPESN 312
           D   +PIPV++Q   PTTPIRK  RNRGLV+QE++VVEDS   N
Sbjct: 269 DSLADPIPVETQAGGPTTPIRKFSRNRGLVLQEKTVVEDSTPEN 312


>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = +1

Query: 4   GHHLVSPKNXXXXXXXXSGEVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITND 183
           G HLVSP+N        SGEV Y+HF FR DFKDWKLM  SV  GEELMP R    + N+
Sbjct: 330 GCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEELMPQRNSVNLPNN 389

Query: 184 FQGEPIPVDSQ-TAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSAADK 327
            Q + +  + +  AAPTTPIRKL RNRGLV+QE++VVEDSPES+ A  +
Sbjct: 390 SQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDAGTR 438


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = +1

Query: 4   GHHLVSPKNXXXXXXXXSGEVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITND 183
           G HLVSP+N        SGEV Y+HF FR DFKDWKLM  SV  GEELMP R    + N+
Sbjct: 258 GCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEELMPQRNSVNLPNN 317

Query: 184 FQGEPIPVDSQ-TAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSAADK 327
            Q + +  + +  AAPTTPIRKL RNRGLV+QE++VVEDSPES+ A  +
Sbjct: 318 SQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDAGTR 366


>ref|XP_002529957.1| Non-structural maintenance of chromosome element, putative [Ricinus
           communis] gi|223530555|gb|EEF32434.1| Non-structural
           maintenance of chromosome element, putative [Ricinus
           communis]
          Length = 391

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/106 (58%), Positives = 71/106 (66%)
 Frame = +1

Query: 1   NGHHLVSPKNXXXXXXXXSGEVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITN 180
           +GHHLVSP+N        SGEV+Y HF FR DFKDWK+MMD V  G+ELMP R  +    
Sbjct: 277 SGHHLVSPRNAPAASSVMSGEVAYRHFVFRFDFKDWKVMMDMVPQGDELMPDRKNSV--- 333

Query: 181 DFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSA 318
             + EP    SQ     TPIRKLCRNRGLVVQE+SVVEDSPE  +A
Sbjct: 334 -SETEPETNISQGNTNRTPIRKLCRNRGLVVQEDSVVEDSPEIEAA 378


>ref|XP_003571216.1| PREDICTED: non-structural maintenance of chromosome element 4-like
           [Brachypodium distachyon]
          Length = 361

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/109 (52%), Positives = 74/109 (67%)
 Frame = +1

Query: 1   NGHHLVSPKNXXXXXXXXSGEVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITN 180
           NGHH+V P+N        SGEVSYSHF FR D++DWKLM + V +GEELMPHR Q    N
Sbjct: 249 NGHHIVYPRNAPAASAIASGEVSYSHFVFRFDYRDWKLMREVVADGEELMPHRTQGSPCN 308

Query: 181 DFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSAADK 327
           + + E +    +  A  TPIRKLCRNRGLV+QE+ VV ++PE++  + K
Sbjct: 309 E-ENEHL----EQCAQQTPIRKLCRNRGLVLQEQMVVAETPEADKTSSK 352