BLASTX nr result

ID: Coptis23_contig00023250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023250
         (1345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27914.3| unnamed protein product [Vitis vinifera]               65   5e-08
ref|XP_002282186.1| PREDICTED: angio-associated migratory cell p...    65   5e-08
gb|AFK35114.1| unknown [Lotus japonicus]                               61   6e-07
gb|ABS32230.1| transducin family protein [Carica papaya] gi|1645...    60   1e-06
ref|XP_002274841.1| PREDICTED: angio-associated migratory cell p...    59   4e-06

>emb|CBI27914.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = -3

Query: 1343 NIDEEDLPDAGDENESEYDVDETDDSIHLFTGHTGELYAVA 1221
            N+D+EDLPDA D ++   DV+E DDS+H+FTGHTGELY VA
Sbjct: 28   NVDDEDLPDAEDADDDAEDVEEADDSMHIFTGHTGELYTVA 68


>ref|XP_002282186.1| PREDICTED: angio-associated migratory cell protein-like [Vitis
            vinifera]
          Length = 391

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = -3

Query: 1343 NIDEEDLPDAGDENESEYDVDETDDSIHLFTGHTGELYAVA 1221
            N+D+EDLPDA D ++   DV+E DDS+H+FTGHTGELY VA
Sbjct: 28   NVDDEDLPDAEDADDDAEDVEEADDSMHIFTGHTGELYTVA 68


>gb|AFK35114.1| unknown [Lotus japonicus]
          Length = 241

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 1343 NIDEEDLPDAGDENESEYDVDETDDSIHLFTGHTGELYAVA 1221
            + D EDLPDA D+ E E+ VDE DDS+H+FTGHTGELY+VA
Sbjct: 32   SFDNEDLPDADDDYEPEH-VDEIDDSVHIFTGHTGELYSVA 71


>gb|ABS32230.1| transducin family protein [Carica papaya] gi|164522082|gb|ABY60781.1|
            transducin family protein [Carica papaya]
          Length = 408

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
 Frame = -3

Query: 1340 IDEEDLPDAGDENESEYD-VDETDDSIHLFTGHTGELYAVA 1221
            +DEEDLPDA D+  S+ + ++E DDS+H+FTGHTGELYAVA
Sbjct: 27   VDEEDLPDAEDDASSDAENIEEPDDSMHIFTGHTGELYAVA 67


>ref|XP_002274841.1| PREDICTED: angio-associated migratory cell protein [Vitis vinifera]
            gi|296088039|emb|CBI35322.3| unnamed protein product
            [Vitis vinifera]
          Length = 391

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -3

Query: 1340 IDEEDLPDAGDENESEYDVDETDDSIHLFTGHTGELYAVA 1221
            +D+EDLPD   E++   D +E DDS+H+FTGHTGELY VA
Sbjct: 29   VDDEDLPDVEGEDDDAEDFEEADDSMHIFTGHTGELYTVA 68


Top