BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023247
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    89   4e-16
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    89   5e-16
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    83   2e-14
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    81   8e-14
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
 Frame = +2

Query: 11  LYYLVATSTDLIMVIRDYNDWVDEV----SEFSYRTTEGFRVFKLDFSCTNAPKWVVTKD 178
           L YLV +  +L++V R Y D   +V    +   YRTT  F+V +LD   + AP+W V   
Sbjct: 253 LQYLVESGEELLLVTR-YLDLTYDVEXDQTSLIYRTTR-FQVCRLD---SKAPRWEVVSS 307

Query: 179 IGDCALFLGTNNSFSVVSSDFPGCRCNCIYFTSHDMETAYYSG----HDKGIFSLDDCMF 346
           +GD ALFLG N S S+ S DFPGC+ NCIY+T  D     Y G     D GIF+L+D   
Sbjct: 308 LGDRALFLGENLSLSLSSVDFPGCKGNCIYYTD-DYSEDNYDGIGGEQDLGIFNLEDGSI 366

Query: 347 EGVCPIDC---KTICPRPLWYSTNP 412
           E   P+ C   +   P PLW + NP
Sbjct: 367 E---PLPCSHFRIRWPPPLWVTPNP 388


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 11/145 (7%)
 Frame = +2

Query: 11  LYYLVATSTDLIMVIRDYNDWVDEV----SEFSYRTTEGFRVFKLDFSCTNAPKWVVTKD 178
           L YLV +  +L++V R Y D   +V    +   YRTT  F+V +LD     AP+W V   
Sbjct: 253 LQYLVESGEELLLVTR-YLDLTYDVEPDQTSLIYRTTR-FQVCRLDLK---APRWEVVSS 307

Query: 179 IGDCALFLGTNNSFSVVSSDFPGCRCNCIYFTSHDMETAYYSG----HDKGIFSLDDCMF 346
           +GD ALFLG N S S+ S DFPGC+ NCIY+T  D     Y G     D GIF+L+D   
Sbjct: 308 LGDRALFLGENLSLSLSSVDFPGCKGNCIYYTD-DYSEDNYDGIGGEQDLGIFNLEDGSI 366

Query: 347 EGVCPIDC---KTICPRPLWYSTNP 412
           E   P+ C   +   P PLW + NP
Sbjct: 367 E---PLPCSHFRIRWPPPLWVTPNP 388


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 18/152 (11%)
 Frame = +2

Query: 11  LYYLVATSTDLIMVIR----DYN-DWVDEVSEFSYRTTEGFRVFKLDFSCTNAPKWVVTK 175
           + YLV +  +L++V R    +Y  D  D      YRT   F VF+LD+   N P+W+   
Sbjct: 256 MQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIR-FEVFRLDW---NGPQWLRMS 311

Query: 176 DIGDCALFLGTNNSFSVVSSDFPGCRCNCIYFTSHDMETAY---YSGHDKGIFSLDDCMF 346
            +GD ALF+G N+S S+ ++DF GC  NCIY+T   ++  Y   +  HD GIF L D   
Sbjct: 312 TLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCD--- 368

Query: 347 EGVCPIDCKTICPR----------PLWYSTNP 412
           E + P+ C    PR          PLW S NP
Sbjct: 369 ETIEPLPC---YPRNFTSPLQWSPPLWVSPNP 397


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 14/148 (9%)
 Frame = +2

Query: 11  LYYLVATSTDLIMVIR----DYNDWVDEVSEFSYRTTEGFRVFKLDFSCTNAPKWVVTKD 178
           ++Y V ++ D++++IR    D++D   E S+  YRT  GF VFK+++       W   + 
Sbjct: 252 IHYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTV-GFEVFKMNWGLLT---WQRVET 307

Query: 179 IGDCALFLGTNNSFSVVSSDFPGCRCNCIYFT---SHDMETAYYSGHDKGIFSLDDCMFE 349
           +G+  LF+G N+S S  +SDF GC  +CIYFT   S   +      HD G+F L D   E
Sbjct: 308 LGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDACGKHDLGVFRLRDKSIE 367

Query: 350 GVCPIDC--KTIC-----PRPLWYSTNP 412
              P+ C  +  C     P P+W S NP
Sbjct: 368 ---PLPCFNQNSCSRLRWPLPIWVSPNP 392


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 55/145 (37%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
 Frame = +2

Query: 11  LYYLVATSTDLIMVIRDYNDWVDEVSEFSYRTTEGFRVFKLDFSCTNAPKWVVTKDIGDC 190
           + YLV++   L++V R Y D   E   F Y+T   F VFKLD    N P+W     +GD 
Sbjct: 257 MQYLVSSGDGLLLVTR-YLDLDVEFDIFIYKTAR-FEVFKLDL---NGPRWERVTSLGDM 311

Query: 191 ALFLGTNNSFSVVSSDFPGCRCNCIYFTSHDMETAYYSG----HDKGIFSLDDCMFEGVC 358
            LF+G N+S ++ +S   GC  +CIY+T  D     Y G    HD GIF L D   E   
Sbjct: 312 MLFIGENSSLALSASGLSGCMGDCIYYTD-DYSANNYDGHIGEHDLGIFKLSDGSIE--- 367

Query: 359 PIDC-------KTICPRPLWYSTNP 412
           P+ C       +   P PLW S NP
Sbjct: 368 PLPCYPRNSYSRLQWPPPLWISPNP 392