BLASTX nr result

ID: Coptis23_contig00023242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023242
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...    99   4e-19
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...    94   1e-17
ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arab...    91   1e-16
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...    91   1e-16

>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 925

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/70 (68%), Positives = 55/70 (78%)
 Frame = -2

Query: 212 GWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVEPKCVGIELGHQGQCRRATT 33
           GWTGAK            VR+GH SI+QSD+DDAVDRLTV PK VGI+LGHQGQCRRATT
Sbjct: 626 GWTGAKLAQLVQEAALVAVRQGHASIIQSDIDDAVDRLTVGPKRVGIDLGHQGQCRRATT 685

Query: 32  EVGIAMTAYL 3
           EVG+AMT++L
Sbjct: 686 EVGVAMTSHL 695


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/70 (67%), Positives = 54/70 (77%)
 Frame = -2

Query: 212 GWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVEPKCVGIELGHQGQCRRATT 33
           GWTGAK            VR+GH +ILQSD+DDAVDRLTV PK VGIELGHQGQCRRATT
Sbjct: 630 GWTGAKLAQLVQEAALVAVRQGHAAILQSDMDDAVDRLTVGPKRVGIELGHQGQCRRATT 689

Query: 32  EVGIAMTAYL 3
           E+G+ MT++L
Sbjct: 690 ELGVVMTSHL 699


>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
           gi|296090151|emb|CBI39970.3| unnamed protein product
           [Vitis vinifera]
          Length = 907

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/70 (67%), Positives = 54/70 (77%)
 Frame = -2

Query: 212 GWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVEPKCVGIELGHQGQCRRATT 33
           GWTGA+            VR+GH +ILQSDVD+AVDRLTV PK VGIELGHQGQCRRATT
Sbjct: 606 GWTGARLAQLLQEAALVAVRKGHEAILQSDVDEAVDRLTVGPKRVGIELGHQGQCRRATT 665

Query: 32  EVGIAMTAYL 3
           EVG A+T++L
Sbjct: 666 EVGTAITSHL 675


>ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp.
           lyrata] gi|297315589|gb|EFH46012.1| hypothetical protein
           ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata]
          Length = 933

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/70 (62%), Positives = 53/70 (75%)
 Frame = -2

Query: 212 GWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVEPKCVGIELGHQGQCRRATT 33
           GW+GAK            VR+ H SILQSD+DDAVDRLTV P  +G+ELGHQGQCRRATT
Sbjct: 628 GWSGAKLAQLVQEAALVAVRKTHSSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATT 687

Query: 32  EVGIAMTAYL 3
           EVG+A+T++L
Sbjct: 688 EVGVAITSHL 697


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
           gi|2262118|gb|AAB63626.1| cell division protein isolog
           [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
           division protein-like [Arabidopsis thaliana]
           gi|7269243|emb|CAB81312.1| cell division protein-like
           [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
           extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/70 (62%), Positives = 53/70 (75%)
 Frame = -2

Query: 212 GWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVEPKCVGIELGHQGQCRRATT 33
           GW+GAK            VR+ H SILQSD+DDAVDRLTV P  +G+ELGHQGQCRRATT
Sbjct: 641 GWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATT 700

Query: 32  EVGIAMTAYL 3
           EVG+A+T++L
Sbjct: 701 EVGVAITSHL 710


Top