BLASTX nr result

ID: Coptis23_contig00023234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023234
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ...   343   2e-92
ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   338   6e-91
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...   336   2e-90
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     335   5e-90
ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   333   2e-89

>ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus
           communis] gi|223550091|gb|EEF51578.1| Oligosaccharide
           translocation protein rft1, putative [Ricinus communis]
          Length = 436

 Score =  343 bits (880), Expect = 2e-92
 Identities = 177/233 (75%), Positives = 196/233 (84%)
 Frame = -1

Query: 702 AYGACXXXXXXXXXXXFRIVRSSNLIPFRLGNMLDLDGKLLHMCKLFTGQSFRKLVLQEG 523
           AYGAC           F    SS L PFRLG ++D D +L +MC LFT QSFRKLVLQEG
Sbjct: 201 AYGACLFIGYWSYFLLFCSFGSSELFPFRLGTIMDYDKQLCNMCMLFTLQSFRKLVLQEG 260

Query: 522 EKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQNPRGNRKLAG 343
           EKM+LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSYATFAR ASGQ+P   RKL G
Sbjct: 261 EKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGQHPEKRRKLGG 320

Query: 342 ALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYCFYVIVLAMNGT 163
            LTEALKLVLLIGLV MAFGPSYSY+LIR+LYG+KWSDGEAS AL+YYC Y+IVLAMNGT
Sbjct: 321 YLTEALKLVLLIGLVFMAFGPSYSYSLIRLLYGNKWSDGEASTALQYYCLYIIVLAMNGT 380

Query: 162 SEAFLHAVATENQLKRSNDSLLIFSGIYILLNISLIRSAGAVGLIAANSLNML 4
           SEAFLHAVATE QLKRSNDSLL+FS IY++LN+ LIRSAGA+GLI ANSL++L
Sbjct: 381 SEAFLHAVATEKQLKRSNDSLLVFSIIYVVLNVLLIRSAGAIGLILANSLSIL 433


>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  338 bits (867), Expect = 6e-91
 Identities = 173/234 (73%), Positives = 196/234 (83%)
 Frame = -1

Query: 702 AYGACXXXXXXXXXXXFRIVRSSNLIPFRLGNMLDLDGKLLHMCKLFTGQSFRKLVLQEG 523
           AYGAC           FR  RSS L PFRLG ++D D +L  MC LFT QSF+KL+LQEG
Sbjct: 150 AYGACLFLGYWSYFVLFRAFRSSVLFPFRLGTIMDYDKQLSSMCVLFTLQSFQKLILQEG 209

Query: 522 EKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQNPRGNRKLAG 343
           EK +LVW DTP+NQAVYGLVDKLG LVVRLVFLPFEESSYATFAR ASG++P  +RKL  
Sbjct: 210 EKFVLVWLDTPYNQAVYGLVDKLGILVVRLVFLPFEESSYATFARSASGKDPNKSRKLGS 269

Query: 342 ALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYCFYVIVLAMNGT 163
            L+EALKLVLLIG+V M FGPSYSY+LIR+LYG KWSDGEAS AL+YYCFYVIVLAMNGT
Sbjct: 270 CLSEALKLVLLIGVVFMTFGPSYSYSLIRMLYGRKWSDGEASTALQYYCFYVIVLAMNGT 329

Query: 162 SEAFLHAVATENQLKRSNDSLLIFSGIYILLNISLIRSAGAVGLIAANSLNMLL 1
           SEAFLHAVATE+QLKRSNDSLL+FS IY+++N+ LI+SAGAVGLI ANSLNM+L
Sbjct: 330 SEAFLHAVATESQLKRSNDSLLVFSLIYVVMNVLLIKSAGAVGLILANSLNMIL 383


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
           gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
           homolog [Cucumis sativus]
          Length = 528

 Score =  336 bits (862), Expect = 2e-90
 Identities = 173/234 (73%), Positives = 193/234 (82%)
 Frame = -1

Query: 702 AYGACXXXXXXXXXXXFRIVRSSNLIPFRLGNMLDLDGKLLHMCKLFTGQSFRKLVLQEG 523
           AYGAC           FR  + S+L PFR+GNM D D KL +MC LFT QSFRKLVLQEG
Sbjct: 203 AYGACLFLGYWVYFLNFRAFKWSDLFPFRVGNMKDFDKKLSNMCILFTLQSFRKLVLQEG 262

Query: 522 EKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQNPRGNRKLAG 343
           EKM+LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSY TFAR ASG+ P   RKLA 
Sbjct: 263 EKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYTTFARSASGEYPDKTRKLAI 322

Query: 342 ALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYCFYVIVLAMNGT 163
            L+EALKLV+LIGL+ MAFGPSYSYALIR+LYG KWSDGEA  ALRYYC Y+IVLAMNGT
Sbjct: 323 CLSEALKLVVLIGLIFMAFGPSYSYALIRLLYGQKWSDGEAPTALRYYCLYIIVLAMNGT 382

Query: 162 SEAFLHAVATENQLKRSNDSLLIFSGIYILLNISLIRSAGAVGLIAANSLNMLL 1
           SEAFLHAVA E+QLK+SNDSLL+FS IY++LN  LIRS+G VGLI ANS+NM+L
Sbjct: 383 SEAFLHAVANESQLKKSNDSLLLFSFIYVMLNFLLIRSSGVVGLIFANSINMIL 436


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  335 bits (859), Expect = 5e-90
 Identities = 175/234 (74%), Positives = 191/234 (81%)
 Frame = -1

Query: 702 AYGACXXXXXXXXXXXFRIVRSSNLIPFRLGNMLDLDGKLLHMCKLFTGQSFRKLVLQEG 523
           AYGAC            +  R S L PFR G M+D D +L  MC LFT QSFRKL+LQEG
Sbjct: 192 AYGACLFLGYWGYLLLSQKFRVSYLFPFREGKMIDFDQQLSKMCILFTFQSFRKLILQEG 251

Query: 522 EKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQNPRGNRKLAG 343
           EK++LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSY TFAR ASGQ P  ++KL  
Sbjct: 252 EKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSASGQYPGKSKKLGN 311

Query: 342 ALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYCFYVIVLAMNGT 163
           +LTE+LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEAS ALR YCFYVIVLAMNGT
Sbjct: 312 SLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGT 371

Query: 162 SEAFLHAVATENQLKRSNDSLLIFSGIYILLNISLIRSAGAVGLIAANSLNMLL 1
           SEAF+HAVATE QLKRSNDSLLIFS IYI+LN+ LIR AGAVGLI ANSLNM L
Sbjct: 372 SEAFMHAVATERQLKRSNDSLLIFSLIYIVLNVMLIRLAGAVGLILANSLNMTL 425


>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  333 bits (854), Expect = 2e-89
 Identities = 172/234 (73%), Positives = 191/234 (81%)
 Frame = -1

Query: 702 AYGACXXXXXXXXXXXFRIVRSSNLIPFRLGNMLDLDGKLLHMCKLFTGQSFRKLVLQEG 523
           AYGAC            +  R S L PFR G ++D D +L  MC LFT QSFRKL+LQEG
Sbjct: 192 AYGACLFLGYWGYLLLSQKFRVSYLFPFREGKVIDFDRQLSKMCMLFTFQSFRKLILQEG 251

Query: 522 EKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQNPRGNRKLAG 343
           EK++LVW DTP+NQAVYGLVDK GSLVVRLVFLPFEESSYATFAR  SGQ P  ++KL  
Sbjct: 252 EKIVLVWLDTPYNQAVYGLVDKFGSLVVRLVFLPFEESSYATFARSTSGQYPGKSKKLGN 311

Query: 342 ALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYCFYVIVLAMNGT 163
            +TE+LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEAS ALR YCFYVIVLAMNGT
Sbjct: 312 GVTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGT 371

Query: 162 SEAFLHAVATENQLKRSNDSLLIFSGIYILLNISLIRSAGAVGLIAANSLNMLL 1
           SEAF+HAVATE+QLKRSNDSLL+FS IYI+LN+ LIRSAGAVGLI ANSLNM L
Sbjct: 372 SEAFMHAVATESQLKRSNDSLLVFSLIYIVLNVLLIRSAGAVGLIMANSLNMTL 425


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