BLASTX nr result

ID: Coptis23_contig00023204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023204
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329084.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
ref|XP_002317501.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002285024.2| PREDICTED: xylosyltransferase oxt [Vitis vin...   144   7e-33
emb|CBI20295.3| unnamed protein product [Vitis vinifera]              144   7e-33
ref|XP_003527246.1| PREDICTED: xylosyltransferase 2-like [Glycin...   139   2e-31

>ref|XP_002329084.1| predicted protein [Populus trichocarpa] gi|222869753|gb|EEF06884.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  151 bits (382), Expect = 5e-35
 Identities = 67/93 (72%), Positives = 79/93 (84%)
 Frame = +2

Query: 2   YIAWDNPPKQHPHILSLNDTAKMINSNALFARKFKGNDPVLNKIDKELLHRTNGSITPGG 181
           YIAWDNPPKQHPH L+LNDT  MI S A FARKFK +DPVL+KIDK+LLHR NGS TPGG
Sbjct: 315 YIAWDNPPKQHPHTLTLNDTDHMIASGAAFARKFKRDDPVLDKIDKDLLHRKNGSFTPGG 374

Query: 182 WCSGKPRCSKVGDPSRLRPGPGARRLTRLMSLI 280
           WCSGKP+CS+VGD  +++PGPGA RL RL++ +
Sbjct: 375 WCSGKPKCSEVGDLDKIKPGPGAHRLKRLIARV 407


>ref|XP_002317501.1| predicted protein [Populus trichocarpa] gi|222860566|gb|EEE98113.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  150 bits (380), Expect = 8e-35
 Identities = 66/93 (70%), Positives = 79/93 (84%)
 Frame = +2

Query: 2   YIAWDNPPKQHPHILSLNDTAKMINSNALFARKFKGNDPVLNKIDKELLHRTNGSITPGG 181
           YIAWDNPPKQHPH L++NDT +MI S A FARKFKG+DPVL+KIDK+LLHR NGS TPGG
Sbjct: 315 YIAWDNPPKQHPHTLTINDTNEMIASGAAFARKFKGDDPVLDKIDKDLLHRKNGSFTPGG 374

Query: 182 WCSGKPRCSKVGDPSRLRPGPGARRLTRLMSLI 280
           WCSG P+CS+VG+   ++PGPGA RL RL+S +
Sbjct: 375 WCSGSPKCSEVGNLDNIKPGPGASRLKRLISRV 407


>ref|XP_002285024.2| PREDICTED: xylosyltransferase oxt [Vitis vinifera]
          Length = 422

 Score =  144 bits (363), Expect = 7e-33
 Identities = 62/94 (65%), Positives = 79/94 (84%)
 Frame = +2

Query: 2   YIAWDNPPKQHPHILSLNDTAKMINSNALFARKFKGNDPVLNKIDKELLHRTNGSITPGG 181
           +I+WDNPPKQHPH L++NDT++MI SNA FARKF+ +DP L+KIDK+LL R  G  TPGG
Sbjct: 318 FISWDNPPKQHPHTLTINDTSRMIGSNAAFARKFRQDDPSLDKIDKDLLGRKKGGFTPGG 377

Query: 182 WCSGKPRCSKVGDPSRLRPGPGARRLTRLMSLIV 283
           WCSG P CSKVGDP++L+PGPGA+RL  L+S ++
Sbjct: 378 WCSGNPPCSKVGDPTKLKPGPGAQRLRLLVSRLL 411


>emb|CBI20295.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  144 bits (363), Expect = 7e-33
 Identities = 62/94 (65%), Positives = 79/94 (84%)
 Frame = +2

Query: 2   YIAWDNPPKQHPHILSLNDTAKMINSNALFARKFKGNDPVLNKIDKELLHRTNGSITPGG 181
           +I+WDNPPKQHPH L++NDT++MI SNA FARKF+ +DP L+KIDK+LL R  G  TPGG
Sbjct: 312 FISWDNPPKQHPHTLTINDTSRMIGSNAAFARKFRQDDPSLDKIDKDLLGRKKGGFTPGG 371

Query: 182 WCSGKPRCSKVGDPSRLRPGPGARRLTRLMSLIV 283
           WCSG P CSKVGDP++L+PGPGA+RL  L+S ++
Sbjct: 372 WCSGNPPCSKVGDPTKLKPGPGAQRLRLLVSRLL 405


>ref|XP_003527246.1| PREDICTED: xylosyltransferase 2-like [Glycine max]
          Length = 422

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/92 (68%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   YIAWDNPPKQHPHILSLNDTAKMINSNALFARKFKGNDPVLNKIDKELLHRTNGSI-TPG 178
           YI+WDNPPKQHPH+L++NDT KMI SNA FARKFK NDPVL+ IDK+LLHR N  + TPG
Sbjct: 317 YISWDNPPKQHPHVLNINDTTKMIASNAAFARKFKHNDPVLDVIDKKLLHRENEQLFTPG 376

Query: 179 GWCSGKPRCSKVGDPSRLRPGPGARRLTRLMS 274
           GWCSG PRCSKVG+  R+ P PG++RL  L++
Sbjct: 377 GWCSGNPRCSKVGNIHRITPSPGSKRLRLLVT 408


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